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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS03295 and ABZR86_RS03300 are separated by 1 nucleotides
ABZR86_RS03300 and ABZR86_RS03305 are separated by 67 nucleotides
ABZR86_RS03305 and ABZR86_RS03310 are separated by 196 nucleotides
ABZR86_RS03310 and ABZR86_RS03315 are separated by 5 nucleotides
ABZR86_RS03295: ABZR86_RS03295 - DUF4255 domain-containing protein, at 693,306 to 693,962
_RS03295
ABZR86_RS03300: ABZR86_RS03300 - hypothetical protein, at 693,964 to 694,983
_RS03300
ABZR86_RS03305: ABZR86_RS03305 - phage tail sheath C-terminal domain-containing protein, at 695,051 to 696,439
_RS03305
ABZR86_RS03310: ABZR86_RS03310 - phage tail protein, at 696,636 to 697,076
_RS03310
ABZR86_RS03315: ABZR86_RS03315 - phage tail protein, at 697,082 to 697,537
_RS03315
Group
Condition
ABZR86
_RS03295
ABZR86
_RS03300
ABZR86
_RS03305
ABZR86
_RS03310
ABZR86
_RS03315
nitrogen source
L-Asparagine (N)
-0.7
+0.2
+0.1
N.D.
-4.4
stress
Tetracycline 0.024 mg/ml
-0.4
-1.1
+0.3
N.D.
-0.9
stress
Chloramphenicol 0.008 mg/ml
+0.0
-0.1
+0.0
N.D.
-2.1
stress
sodium fluoride 60 mM
-0.1
-0.5
-0.2
N.D.
-1.1
stress
nitrate 200 mM
-0.3
-0.8
-0.1
N.D.
-0.4
stress
Dimethyl Sulfoxide 7.5 vol%
-0.5
-0.4
-0.3
N.D.
-0.2
lb
LB
-0.8
-0.6
-0.1
N.D.
+0.1
carbon source
NAG (C)
-0.1
-0.4
-0.2
N.D.
-0.7
lb
LB
-0.2
-0.4
-0.1
N.D.
-0.7
nitrogen source
L-Leucine (N)
-1.2
-0.2
+0.1
N.D.
-0.1
carbon source
L-Alanine (C)
+0.1
-0.2
-0.0
N.D.
-1.1
nitrogen source
nitrate (N)
-0.0
-0.4
+0.0
N.D.
-0.6
carbon source
D-Glucose (C)
-0.1
-0.1
+0.1
N.D.
-0.9
stress
Thallium(I) acetate 0.008 mg/ml
-0.5
-0.7
-0.3
N.D.
+0.6
stress
Paraquat dichloride 0.2 mg/ml
-0.5
-0.3
-0.3
N.D.
+0.3
carbon source
D-Fructose (C)
-0.2
+0.2
-0.0
N.D.
-0.7
carbon source
D-Cellobiose (C)
-0.2
+0.1
+0.3
N.D.
-0.8
stress
Spectinomycin 0.04 mg/ml
+0.2
+0.0
-0.1
N.D.
-0.9
stress
Cisplatin 0.0032 mg/ml
-0.6
-0.1
-0.2
N.D.
+0.4
carbon source
a-Cyclodextrin (C)
+0.3
-0.2
-0.0
N.D.
-0.5
lb
LB
-0.5
-0.4
-0.1
N.D.
+0.7
nitrogen source
L-Arginine (N)
+0.3
+0.2
-0.2
N.D.
-0.5
stress
Paraquat dichloride 0.05 mg/ml
-0.3
-0.1
-0.2
N.D.
+0.6
stress
Ceftazidime 0.05 mg/ml
-0.6
+0.1
-0.1
N.D.
+0.8
stress
Nalidixic 0.08 mg/ml
-0.2
-0.5
+0.1
N.D.
+0.9
stress
Fusidic 0.2 mg/ml
+0.3
+0.1
-0.6
N.D.
+0.5
stress
Fusidic 0.4 mg/ml
+0.5
+0.1
+0.1
N.D.
-0.3
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.5
-0.1
-0.2
N.D.
+0.3
stress
Nalidixic 0.04 mg/ml
-0.2
+0.2
-0.2
N.D.
+0.7
lb
LB
+0.1
+0.8
+0.3
N.D.
+0.6
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