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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS02960 and ABZR86_RS02965 are separated by 164 nucleotides
ABZR86_RS02965 and ABZR86_RS02970 are separated by 214 nucleotides
ABZR86_RS02970 and ABZR86_RS02975 are separated by 113 nucleotides
ABZR86_RS02975 and ABZR86_RS02980 are separated by 388 nucleotides
ABZR86_RS02960: ABZR86_RS02960 - BON domain-containing protein, at 605,631 to 606,185
_RS02960
ABZR86_RS02965: ABZR86_RS02965 - hypothetical protein, at 606,350 to 606,541
_RS02965
ABZR86_RS02970: ABZR86_RS02970 - PAS domain-containing sensor histidine kinase, at 606,756 to 608,690
_RS02970
ABZR86_RS02975: ABZR86_RS02975 - response regulator, at 608,804 to 609,205
_RS02975
ABZR86_RS02980: ABZR86_RS02980 - DUF3182 family protein, at 609,594 to 610,724
_RS02980
Group
Condition
ABZR86
_RS02960
ABZR86
_RS02965
ABZR86
_RS02970
ABZR86
_RS02975
ABZR86
_RS02980
stress
Nalidixic 0.08 mg/ml
-0.4
N.D.
-0.4
-0.2
-0.1
nitrogen source
L-Asparagine (N)
-0.6
N.D.
-0.8
+0.2
+0.3
carbon source
D-Galactose (C)
-0.4
N.D.
-0.0
-0.5
-0.0
stress
A22 0.01 mg/ml
-0.3
N.D.
-0.0
-0.5
+0.1
carbon source
D-Maltose (C)
-0.3
N.D.
+0.1
-0.7
+0.1
stress
Ceftazidime 0.05 mg/ml
-0.4
N.D.
+0.1
-0.3
-0.1
stress
Tetracycline 0.024 mg/ml
-0.2
N.D.
+0.0
-0.4
-0.2
carbon source
a-Cyclodextrin (C)
+0.1
N.D.
+0.1
-0.8
+0.1
lb
LB
-0.3
N.D.
-0.0
-0.3
+0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.1
N.D.
-0.1
-0.5
-0.1
lb
LB
+0.3
N.D.
-0.5
-0.3
+0.1
carbon source
D-Glucose (C)
+0.0
N.D.
-0.0
-0.6
+0.1
carbon source
L-Proline (C)
-0.5
N.D.
-0.0
-0.1
+0.2
carbon source
D-Glucose (C)
-0.5
N.D.
+0.1
-0.1
+0.1
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.5
N.D.
-0.1
+0.2
+0.0
nitrogen source
L-Proline (N)
-0.2
N.D.
-0.4
+0.4
-0.1
stress
perchlorate 75 mM
+0.2
N.D.
-0.1
-0.5
+0.1
nitrogen source
L-Leucine (N)
-0.4
N.D.
+0.2
-0.1
+0.1
carbon source
L-Proline (C)
-0.4
N.D.
+0.3
-0.1
+0.0
stress
sodium fluoride 60 mM
+0.4
N.D.
-0.1
-0.4
+0.1
nitrogen source
Glucuronamide (N)
-0.4
N.D.
-0.0
+0.2
+0.1
carbon source
pyruvate (C)
+0.2
N.D.
+0.2
-0.6
+0.2
stress
Carbenicillin 0.04 mg/ml
+0.3
N.D.
-0.2
+0.2
+0.0
stress
Chloramphenicol 0.008 mg/ml
-0.3
N.D.
+0.3
+0.3
-0.0
stress
Tetracycline 0.012 mg/ml
+0.5
N.D.
-0.2
+0.2
-0.0
nitrogen source
L-Arginine (N)
+0.3
N.D.
-0.1
+0.4
-0.0
stress
Nalidixic 0.04 mg/ml
+0.5
N.D.
-0.1
+0.2
+0.2
stress
nitrite 6 mM
+0.5
N.D.
+0.2
+0.1
+0.1
carbon source
D-Fructose (C)
+0.6
N.D.
-0.3
+0.0
+0.4
stress
Spectinomycin 0.04 mg/ml
+0.6
N.D.
-0.1
+0.5
+0.1
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