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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS02580 and ABZR86_RS02585 are separated by 8 nucleotides
ABZR86_RS02585 and ABZR86_RS02590 overlap by 23 nucleotides
ABZR86_RS02590 and ABZR86_RS02595 overlap by 4 nucleotides
ABZR86_RS02595 and ABZR86_RS02600 are separated by 54 nucleotides
ABZR86_RS02580: ABZR86_RS02580 - terminase large subunit, at 522,928 to 524,613
_RS02580
ABZR86_RS02585: ABZR86_RS02585 - phage portal protein, at 524,622 to 525,902
_RS02585
ABZR86_RS02590: ABZR86_RS02590 - head maturation protease, ClpP-related, at 525,880 to 526,734
_RS02590
ABZR86_RS02595: ABZR86_RS02595 - phage major capsid protein, at 526,731 to 527,969
_RS02595
ABZR86_RS02600: ABZR86_RS02600 - hypothetical protein, at 528,024 to 528,194
_RS02600
Group
Condition
ABZR86
_RS02580
ABZR86
_RS02585
ABZR86
_RS02590
ABZR86
_RS02595
ABZR86
_RS02600
nitrogen source
L-Asparagine (N)
+0.4
-0.3
-0.0
-0.5
-0.8
stress
Tetracycline 0.024 mg/ml
+0.1
-0.0
-0.5
+0.1
-0.6
nitrogen source
L-Lysine (N)
-0.3
+0.2
-0.3
-0.1
-0.4
stress
Chloramphenicol 0.008 mg/ml
-0.0
-0.2
-0.1
-0.1
-0.5
carbon source
D-Fructose (C)
+0.2
-0.1
-0.1
-0.1
-0.5
carbon source
pyruvate (C)
+0.1
-0.2
-0.3
+0.1
-0.1
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.2
-0.3
+0.0
+0.0
-0.3
carbon source
D-Maltose (C)
+0.1
+0.1
-0.3
+0.0
-0.3
stress
Chloramphenicol 0.012 mg/ml
+0.2
-0.1
-0.2
+0.1
-0.4
stress
Paraquat dichloride 0.2 mg/ml
-0.1
-0.0
+0.1
+0.1
-0.3
stress
D-Cycloserine 0.032 mg/ml
+0.1
+0.0
+0.2
-0.1
-0.4
carbon source
D-Cellobiose (C)
+0.2
+0.0
-0.2
+0.1
-0.3
carbon source
D-Glucose (C)
+0.2
+0.1
-0.1
+0.0
-0.4
stress
Chloride 250 mM
+0.3
-0.0
-0.1
-0.1
-0.3
stress
Nalidixic 0.04 mg/ml
+0.1
+0.4
-0.2
-0.1
-0.3
nitrogen source
L-Isoleucine (N)
+0.2
+0.1
-0.2
+0.1
-0.4
carbon source
L-Proline (C)
+0.2
+0.1
-0.2
+0.3
-0.4
carbon source
D-Cellobiose (C)
+0.1
+0.3
-0.1
+0.2
-0.3
nitrogen source
L-Leucine (N)
+0.2
-0.1
+0.3
+0.1
-0.2
carbon source
D-Fructose (C)
+0.4
-0.1
+0.0
+0.1
-0.1
stress
Spectinomycin 0.04 mg/ml
+0.1
-0.1
+0.5
-0.0
-0.2
lb
LB
+0.7
+0.0
-0.0
-0.0
-0.2
lb
LB
+0.1
-0.2
+0.1
+0.1
+0.3
stress
Fusidic 0.4 mg/ml
+0.3
-0.3
+0.1
+0.0
+0.3
nitrogen source
L-Proline (N)
+0.3
+0.2
+0.2
+0.2
-0.3
carbon source
L-Alanine (C)
+0.2
+0.1
+0.3
+0.2
-0.3
carbon source
D-Maltose (C)
-0.1
+0.3
+0.2
+0.0
+0.1
carbon source
D-Glucose (C)
+0.3
+0.1
-0.2
+0.1
+0.2
carbon source
D-Galactose (C)
+0.2
+0.2
+0.2
+0.2
+0.1
carbon source
NAG (C)
+0.4
+0.2
+0.2
+0.2
+0.1
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