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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS02515 and ABZR86_RS02520 overlap by 4 nucleotides
ABZR86_RS02520 and ABZR86_RS02525 overlap by 4 nucleotides
ABZR86_RS02525 and ABZR86_RS02530 overlap by 1 nucleotides
ABZR86_RS02530 and ABZR86_RS02535 overlap by 4 nucleotides
ABZR86_RS02515: ABZR86_RS02515 - hypothetical protein, at 515,466 to 515,873
_RS02515
ABZR86_RS02520: ABZR86_RS02520 - DEAD/DEAH box helicase, at 515,870 to 517,621
_RS02520
ABZR86_RS02525: ABZR86_RS02525 - hypothetical protein, at 517,618 to 518,376
_RS02525
ABZR86_RS02530: ABZR86_RS02530 - hypothetical protein, at 518,376 to 518,795
_RS02530
ABZR86_RS02535: ABZR86_RS02535 - hypothetical protein, at 518,792 to 519,040
_RS02535
Group
Condition
ABZR86
_RS02515
ABZR86
_RS02520
ABZR86
_RS02525
ABZR86
_RS02530
ABZR86
_RS02535
carbon source
D-Fructose (C)
-0.5
-0.2
-0.1
-0.7
-0.5
carbon source
D-Fructose (C)
-0.9
-0.0
-0.1
-0.8
+0.1
carbon source
NAG (C)
-1.0
-0.1
+0.0
-0.6
-0.0
carbon source
L-Alanine (C)
-0.6
-0.0
-0.2
-0.6
-0.3
carbon source
NAG (C)
-0.2
-0.3
-0.2
-0.6
-0.2
carbon source
D-Galactose (C)
-0.3
-0.1
-0.1
-1.0
+0.1
nitrogen source
Casamino Acids (N)
-0.5
-0.1
-0.2
-0.4
-0.2
carbon source
L-Alanine (C)
-0.4
-0.2
-0.1
-0.5
-0.0
nitrogen source
Glucuronamide (N)
-0.4
-0.2
-0.2
-0.5
+0.0
nitrogen source
D-Glucosamine Hydrochloride (N)
-0.4
-0.2
-0.3
-0.4
+0.1
nitrogen source
L-Isoleucine (N)
-0.4
-0.1
+0.2
-1.0
+0.1
carbon source
a-Cyclodextrin (C)
+0.1
-0.1
+0.1
-0.8
-0.4
carbon source
pyruvate (C)
+0.0
-0.2
+0.0
-0.6
-0.3
carbon source
L-Proline (C)
-0.1
-0.0
+0.2
-0.4
-0.5
stress
A22 0.02 mg/ml
-0.6
+0.1
+0.0
-0.3
-0.0
nitrogen source
L-Leucine (N)
-0.3
-0.1
+0.1
-0.6
+0.0
lb
LB
-1.1
+0.0
-0.1
+0.1
+0.3
nitrogen source
nitrate (N)
+0.0
-0.2
+0.0
-0.7
+0.2
carbon source
D-Glucose (C)
-0.5
-0.1
+0.1
-0.4
+0.2
carbon source
L-Proline (C)
+0.3
-0.0
+0.1
-0.5
-0.5
carbon source
pyruvate (C)
-0.2
-0.2
+0.0
-0.4
+0.3
carbon source
D-Glucose (C)
-0.2
-0.1
+0.2
-0.3
-0.3
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.0
-0.1
+0.1
-0.6
+0.3
carbon source
D-Maltose (C)
-0.2
-0.0
+0.3
-0.5
+0.1
stress
Spectinomycin 0.04 mg/ml
+0.3
+0.0
+0.1
-0.3
-0.3
stress
Ceftazidime 0.05 mg/ml
+0.5
-0.1
+0.0
-0.2
+0.1
nitrogen source
L-Proline (N)
+0.2
+0.2
+0.1
-0.2
+0.4
nitrogen source
L-Asparagine (N)
-0.5
+0.6
+0.9
+0.2
-0.2
stress
Tetracycline 0.024 mg/ml
+0.5
+0.1
+0.0
+0.4
+0.1
stress
nitrite 6 mM
+0.4
+0.1
+0.4
+0.1
+0.1
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ABZR86_RS02525
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