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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS01780 and ABZR86_RS01785 are separated by 112 nucleotides
ABZR86_RS01785 and ABZR86_RS01790 are separated by 111 nucleotides
ABZR86_RS01790 and ABZR86_RS01795 are separated by 2 nucleotides
ABZR86_RS01795 and ABZR86_RS01800 are separated by 0 nucleotides
ABZR86_RS01780: ABZR86_RS01780 - helix-turn-helix domain-containing protein, at 385,697 to 386,659
_RS01780
ABZR86_RS01785: ABZR86_RS01785 - cysteine hydrolase family protein, at 386,772 to 387,416
_RS01785
ABZR86_RS01790: ABZR86_RS01790 - leucyl/phenylalanyl-tRNA--protein transferase, at 387,528 to 388,262
_RS01790
ABZR86_RS01795: ABZR86_RS01795 - GNAT family N-acetyltransferase, at 388,265 to 389,449
_RS01795
ABZR86_RS01800: ABZR86_RS01800 - DsbA family protein, at 389,450 to 390,109
_RS01800
Group
Condition
ABZR86
_RS01780
ABZR86
_RS01785
ABZR86
_RS01790
ABZR86
_RS01795
ABZR86
_RS01800
nitrogen source
L-Asparagine (N)
-0.6
-1.0
-0.0
+0.3
-0.7
stress
Spectinomycin 0.04 mg/ml
-0.4
-0.2
+0.1
-0.3
-0.4
stress
Nalidixic 0.08 mg/ml
-0.1
-0.4
-0.3
+0.1
-0.4
stress
Fusidic 0.4 mg/ml
-0.3
+0.1
-0.3
-0.0
-0.2
stress
Zinc 2.5 mM
+0.2
-0.2
+0.0
-0.0
-0.3
lb
LB
+0.4
-0.4
+0.1
-0.0
-0.3
lb
LB
-0.5
+0.1
-0.0
+0.2
-0.0
stress
sodium fluoride 40 mM
-0.1
-0.3
+0.1
+0.1
+0.1
nitrogen source
L-Leucine (N)
+0.1
-0.4
+0.0
+0.1
+0.0
carbon source
D-Maltose (C)
+0.2
-0.5
+0.3
+0.0
+0.0
carbon source
D-Glucose (C)
+0.2
+0.2
-0.0
-0.2
-0.1
carbon source
a-Cyclodextrin (C)
+0.1
-0.3
+0.3
+0.0
-0.1
stress
Tetracycline 0.024 mg/ml
-0.0
+0.4
+0.0
-0.1
-0.2
carbon source
D-Maltose (C)
+0.3
-0.1
+0.2
-0.2
-0.1
carbon source
L-Proline (C)
-0.1
-0.1
+0.3
+0.1
+0.0
nitrogen source
Casamino Acids (N)
-0.2
+0.2
+0.0
+0.2
-0.1
stress
Chlorite 0.32 mM
-0.4
+0.4
+0.0
+0.0
+0.2
carbon source
NAG (C)
+0.3
-0.4
+0.4
+0.2
-0.3
stress
Chloramphenicol 0.008 mg/ml
-0.3
+0.2
+0.0
+0.2
+0.2
nitrogen source
L-Proline (N)
+0.2
+0.3
+0.1
+0.0
-0.3
carbon source
L-Alanine (C)
+0.2
-0.2
+0.4
+0.1
-0.0
stress
Thallium(I) acetate 0.016 mg/ml
+0.3
+0.1
-0.1
+0.1
+0.1
stress
perchlorate 75 mM
-0.0
+0.1
+0.0
+0.0
+0.4
stress
D-Cycloserine 0.032 mg/ml
+0.2
+0.1
+0.1
+0.2
+0.1
carbon source
L-Alanine (C)
+0.2
+0.1
+0.3
+0.0
+0.1
carbon source
D-Fructose (C)
+0.3
+0.2
+0.1
+0.1
+0.1
stress
Paraquat dichloride 0.05 mg/ml
+0.0
+0.4
+0.1
-0.1
+0.3
carbon source
NAG (C)
+0.3
-0.0
+0.4
+0.1
+0.1
carbon source
pyruvate (C)
+0.3
+0.1
+0.4
+0.2
+0.2
carbon source
D-Galactose (C)
+0.3
+0.1
+0.7
+0.3
+0.1
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