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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS01735 and ABZR86_RS01740 are separated by 742 nucleotides
ABZR86_RS01740 and ABZR86_RS01745 are separated by 139 nucleotides
ABZR86_RS01745 and ABZR86_RS01750 overlap by 4 nucleotides
ABZR86_RS01750 and ABZR86_RS01755 are separated by 45 nucleotides
ABZR86_RS01735: ABZR86_RS01735 - hypothetical protein, at 374,639 to 375,061
_RS01735
ABZR86_RS01740: ABZR86_RS01740 - protease pro-enzyme activation domain-containing protein, at 375,804 to 378,080
_RS01740
ABZR86_RS01745: ABZR86_RS01745 - heavy metal-responsive transcriptional regulator, at 378,220 to 378,645
_RS01745
ABZR86_RS01750: ABZR86_RS01750 - heavy metal translocating P-type ATPase, at 378,642 to 381,113
_RS01750
ABZR86_RS01755: ABZR86_RS01755 - helix-turn-helix domain-containing protein, at 381,159 to 381,893
_RS01755
Group
Condition
ABZR86
_RS01735
ABZR86
_RS01740
ABZR86
_RS01745
ABZR86
_RS01750
ABZR86
_RS01755
stress
Zinc 2.5 mM
-0.0
-0.1
+0.1
-0.2
-2.5
carbon source
D-Galactose (C)
+0.1
+0.1
-0.1
-1.6
-1.0
lb
LB
-0.0
-0.2
-0.2
+0.1
-2.0
stress
Nalidixic 0.01 mg/ml
-0.0
-0.0
-0.3
+0.0
-1.8
carbon source
L-Alanine (C)
-0.2
-0.0
-0.2
-1.3
-0.1
stress
nitrate 150 mM
-0.1
-0.0
-0.2
+0.0
-1.5
stress
Nalidixic 0.02 mg/ml
-0.0
-0.0
+0.2
-0.0
-1.8
stress
Ceftazidime 0.1 mg/ml
-0.1
-0.0
-0.3
-0.1
-1.2
stress
Chlorite 0.32 mM
-0.1
-0.1
-0.0
+0.0
-1.4
stress
sodium fluoride 40 mM
-0.1
+0.0
-0.7
+0.0
-0.8
stress
D-Cycloserine 0.032 mg/ml
+0.1
+0.1
+0.1
-0.0
-1.5
stress
Spectinomycin 0.04 mg/ml
+0.2
+0.0
-0.4
-0.3
-0.9
stress
Carbenicillin 0.02 mg/ml
-0.0
-0.1
+0.1
+0.1
-1.3
stress
Fusidic 0.4 mg/ml
+0.0
+0.0
-0.4
-0.1
-0.8
stress
Ceftazidime 0.05 mg/ml
+0.1
+0.0
+0.2
-0.0
-1.5
stress
Cisplatin 0.0032 mg/ml
-0.0
+0.1
-0.2
+0.1
-1.1
lb
LB
-0.1
-0.0
+0.1
+0.1
-1.3
stress
perchlorate 75 mM
-0.0
+0.1
+0.1
+0.1
-1.5
stress
Carbenicillin 0.04 mg/ml
+0.1
-0.0
+0.0
+0.1
-1.2
carbon source
L-Alanine (C)
-0.0
+0.0
+0.2
-1.2
-0.1
stress
nitrite 6 mM
+0.2
-0.0
+0.2
-0.3
-1.1
nitrogen source
L-Arginine (N)
+0.2
-0.1
+0.0
-0.0
-1.1
stress
Chloramphenicol 0.008 mg/ml
-0.1
+0.0
+0.2
+0.0
-1.0
carbon source
D-Fructose (C)
+0.2
+0.0
-0.1
+0.1
-1.0
stress
Tetracycline 0.024 mg/ml
-0.1
-0.2
-0.8
+0.1
+0.3
carbon source
a-Cyclodextrin (C)
-0.0
-0.0
+0.3
-0.2
-0.7
lb
LB
+0.3
+0.1
-0.2
-0.4
-0.3
carbon source
D-Cellobiose (C)
+0.1
+0.0
+0.3
-0.2
-0.7
carbon source
L-Proline (C)
+0.1
+0.0
+0.3
+0.1
-1.0
carbon source
NAG (C)
+0.2
+0.0
+0.2
+0.1
-0.8
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