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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS01515 and ABZR86_RS01520 are separated by 736 nucleotides
ABZR86_RS01520 and ABZR86_RS01525 are separated by 166 nucleotides
ABZR86_RS01525 and ABZR86_RS01530 overlap by 1 nucleotides
ABZR86_RS01530 and ABZR86_RS01535 are separated by 187 nucleotides
ABZR86_RS01515: ABZR86_RS01515 - hypothetical protein, at 329,404 to 330,375
_RS01515
ABZR86_RS01520: ABZR86_RS01520 - alpha-L-arabinofuranosidase C-terminal domain-containing protein, at 331,112 to 332,626
_RS01520
ABZR86_RS01525: ABZR86_RS01525 - ATP-binding protein, at 332,793 to 334,202
_RS01525
ABZR86_RS01530: ABZR86_RS01530 - response regulator transcription factor, at 334,202 to 334,867
_RS01530
ABZR86_RS01535: ABZR86_RS01535 - (2Fe-2S)-binding protein, at 335,055 to 335,606
_RS01535
Group
Condition
ABZR86
_RS01515
ABZR86
_RS01520
ABZR86
_RS01525
ABZR86
_RS01530
ABZR86
_RS01535
stress
Zinc 2.5 mM
-0.1
-0.1
-1.7
-0.3
-0.4
stress
Chloramphenicol 0.008 mg/ml
+0.1
-0.0
-1.1
-0.2
-0.4
lb
LB
+0.1
-0.2
-0.6
-0.0
-0.9
stress
Chloramphenicol 0.012 mg/ml
+0.0
+0.1
-0.5
-0.1
-0.8
stress
Tetracycline 0.024 mg/ml
-0.1
+0.1
-0.6
+0.2
-0.4
carbon source
a-Cyclodextrin (C)
+0.1
-0.0
-0.3
+0.1
-0.6
stress
Fusidic 0.2 mg/ml
+0.0
-0.0
-0.9
+0.0
+0.1
stress
Nalidixic 0.08 mg/ml
-0.2
-0.3
-0.3
-0.0
+0.3
stress
A22 0.01 mg/ml
-0.0
-0.1
+0.3
+0.1
-0.5
stress
D-Cycloserine 0.032 mg/ml
+0.1
-0.2
+0.4
-0.1
-0.4
stress
nitrite 6 mM
-0.1
-0.0
+0.5
-0.2
-0.3
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.0
-0.1
+0.5
-0.1
-0.3
stress
Tetracycline 0.012 mg/ml
+0.0
+0.1
+0.5
+0.1
-0.4
carbon source
D-Fructose (C)
-0.0
-0.2
+0.8
-0.0
-0.3
stress
Spectinomycin 0.04 mg/ml
+0.1
+0.2
+0.8
-0.1
-0.6
stress
Sisomicin 0.016 mg/ml
+0.2
-0.1
+0.4
-0.4
+0.1
stress
Cisplatin 0.0032 mg/ml
-0.1
+0.1
+0.8
-0.1
-0.1
stress
perchlorate 75 mM
-0.1
-0.1
+0.8
-0.1
+0.0
carbon source
D-Glucose (C)
-0.2
-0.2
+0.8
+0.1
+0.1
stress
Carbenicillin 0.04 mg/ml
-0.0
+0.0
+0.9
-0.1
-0.1
stress
sodium fluoride 40 mM
-0.0
+0.0
+0.8
+0.0
-0.1
carbon source
D-Cellobiose (C)
-0.0
-0.0
+0.8
-0.1
+0.1
stress
Nalidixic 0.02 mg/ml
+0.2
-0.0
+0.4
-0.1
+0.4
nitrogen source
L-Asparagine (N)
+0.3
-0.3
+0.1
+0.4
+0.4
carbon source
L-Proline (C)
-0.1
+0.2
+0.6
-0.0
+0.3
stress
Nalidixic 0.04 mg/ml
-0.1
+0.1
+1.1
-0.1
+0.1
carbon source
D-Glucose (C)
+0.2
-0.1
+0.6
+0.2
+0.2
carbon source
NAG (C)
+0.1
-0.0
+1.2
-0.1
-0.2
carbon source
pyruvate (C)
+0.1
-0.1
+1.0
+0.1
+0.1
nitrogen source
nitrate (N)
+0.2
-0.1
+1.2
+0.0
+0.1
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