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Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS01210 and ABZR86_RS01215 are separated by 2 nucleotides
ABZR86_RS01215 and ABZR86_RS01220 overlap by 4 nucleotides
ABZR86_RS01220 and ABZR86_RS01225 are separated by 14 nucleotides
ABZR86_RS01225 and ABZR86_RS01230 overlap by 4 nucleotides
ABZR86_RS01210: ABZR86_RS01210 - SDR family oxidoreductase, at 251,140 to 251,904
_RS01210
ABZR86_RS01215: ABZR86_RS01215 - galactonate dehydratase, at 251,907 to 253,055
_RS01215
ABZR86_RS01220: ABZR86_RS01220 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 253,052 to 253,693
_RS01220
ABZR86_RS01225: ABZR86_RS01225 - 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58)
(from data)
, at 253,708 to 254,628
_RS01225
ABZR86_RS01230: ABZR86_RS01230 - FadR/GntR family transcriptional regulator, at 254,625 to 255,350
_RS01230
Group
Condition
ABZR86
_RS01210
ABZR86
_RS01215
ABZR86
_RS01220
ABZR86
_RS01225
ABZR86
_RS01230
carbon source
D-Galactose (C)
-5.4
-5.1
-6.0
-4.9
-2.7
stress
Fusidic 0.2 mg/ml
-0.3
-0.1
-0.4
-0.5
-0.3
carbon source
a-Cyclodextrin (C)
-0.1
-0.1
-0.3
-0.1
-0.4
stress
Sisomicin 0.016 mg/ml
-0.1
-0.4
-0.5
+0.0
-0.1
carbon source
D-Maltose (C)
-0.5
+0.0
+0.3
-0.3
-0.2
stress
Chlorite 0.32 mM
+0.3
-0.4
-0.9
+0.3
+0.1
carbon source
NAG (C)
-0.4
-0.0
-0.5
+0.1
+0.3
carbon source
a-Cyclodextrin (C)
-0.1
-0.0
+0.5
+0.0
-0.7
nitrogen source
L-Proline (N)
+0.4
-0.1
-0.3
-0.1
-0.2
stress
Nalidixic 0.08 mg/ml
+0.1
-0.1
+0.2
-0.0
-0.4
lb
LB
+0.3
-0.1
-0.1
-0.5
+0.2
stress
Tetracycline 0.024 mg/ml
-0.2
-0.0
+0.3
+0.1
-0.3
stress
Thallium(I) acetate 0.008 mg/ml
+0.1
+0.0
-0.5
+0.2
-0.1
stress
Carbenicillin 0.04 mg/ml
-0.4
+0.0
+0.1
+0.3
-0.1
stress
Carbenicillin 0.02 mg/ml
-0.2
+0.1
+0.4
-0.0
-0.3
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.2
-0.2
-0.2
+0.2
+0.4
carbon source
L-Proline (C)
-0.3
-0.0
-0.1
+0.3
+0.2
carbon source
L-Proline (C)
+0.4
+0.2
+0.0
-0.2
-0.2
lb
LB
+0.3
-0.5
+0.2
-0.1
+0.4
stress
A22 0.02 mg/ml
+0.3
+0.1
+0.0
-0.3
+0.3
stress
Chloramphenicol 0.012 mg/ml
+0.2
-0.1
+0.2
-0.1
+0.6
nitrogen source
Glucuronamide (N)
+0.4
+0.0
+0.3
+0.1
+0.2
nitrogen source
L-Lysine (N)
+0.1
+0.0
+0.1
+0.3
+0.5
carbon source
D-Cellobiose (C)
+0.5
-0.1
+0.5
-0.3
+0.4
nitrogen source
L-Asparagine (N)
+0.1
-0.2
+0.0
+0.4
+0.7
carbon source
pyruvate (C)
+0.4
-0.1
+0.8
+0.2
-0.3
nitrogen source
L-Isoleucine (N)
+0.2
+0.2
+0.4
+0.4
+0.2
carbon source
D-Fructose (C)
+0.2
+0.4
+0.6
+0.1
-0.0
carbon source
D-Glucose (C)
+0.2
-0.0
+0.7
+0.1
+0.4
carbon source
D-Fructose (C)
+0.5
+0.2
+0.8
+0.4
+0.4
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