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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS01195 and ABZR86_RS01200 are separated by 247 nucleotides
ABZR86_RS01200 and ABZR86_RS01205 are separated by 61 nucleotides
ABZR86_RS01205 and ABZR86_RS01210 overlap by 4 nucleotides
ABZR86_RS01210 and ABZR86_RS01215 are separated by 2 nucleotides
ABZR86_RS01195: ABZR86_RS01195 - RICIN domain-containing protein, at 246,993 to 248,540
_RS01195
ABZR86_RS01200: ABZR86_RS01200 - sugar porter family MFS transporter, at 248,788 to 250,179
_RS01200
ABZR86_RS01205: ABZR86_RS01205 - D-galactanolactonase
(from data)
, at 250,241 to 251,143
_RS01205
ABZR86_RS01210: ABZR86_RS01210 - SDR family oxidoreductase, at 251,140 to 251,904
_RS01210
ABZR86_RS01215: ABZR86_RS01215 - galactonate dehydratase, at 251,907 to 253,055
_RS01215
Group
Condition
ABZR86
_RS01195
ABZR86
_RS01200
ABZR86
_RS01205
ABZR86
_RS01210
ABZR86
_RS01215
carbon source
D-Galactose (C)
-0.1
-0.7
-4.2
-5.4
-5.1
stress
Sisomicin 0.016 mg/ml
-0.1
+0.0
-0.3
-0.1
-0.4
carbon source
D-Maltose (C)
-0.0
-0.2
+0.0
-0.5
+0.0
stress
Chlorite 0.32 mM
-0.1
+0.5
-0.6
+0.3
-0.4
stress
Carbenicillin 0.04 mg/ml
-0.1
+0.1
+0.1
-0.4
+0.0
stress
perchlorate 75 mM
-0.1
+0.2
-0.3
-0.2
-0.0
carbon source
L-Alanine (C)
-0.0
+0.0
-0.1
-0.3
+0.2
stress
D-Cycloserine 0.032 mg/ml
+0.1
-0.2
-0.1
+0.2
-0.1
carbon source
D-Glucose (C)
-0.0
-0.3
+0.2
+0.2
-0.0
nitrogen source
L-Asparagine (N)
+0.1
-0.1
+0.1
+0.1
-0.2
nitrogen source
N-Acetyl-D-glucosamine (N)
-0.0
+0.3
+0.3
-0.2
-0.2
stress
Nalidixic 0.02 mg/ml
-0.1
+0.2
-0.1
+0.3
-0.0
stress
Chloramphenicol 0.008 mg/ml
-0.0
-0.1
+0.1
+0.1
+0.2
stress
A22 0.02 mg/ml
-0.1
-0.1
+0.1
+0.3
+0.1
lb
LB
-0.1
+0.2
+0.5
+0.3
-0.5
lb
LB
-0.0
+0.3
-0.1
+0.1
+0.1
lb
LB
-0.0
+0.1
+0.1
+0.3
-0.1
nitrogen source
L-Isoleucine (N)
-0.1
-0.0
+0.2
+0.2
+0.2
nitrogen source
L-Proline (N)
+0.1
+0.2
-0.1
+0.4
-0.1
stress
Nalidixic 0.08 mg/ml
+0.1
+0.3
+0.1
+0.1
-0.1
stress
Chloramphenicol 0.012 mg/ml
-0.1
+0.3
+0.1
+0.2
-0.1
carbon source
L-Alanine (C)
-0.0
+0.3
-0.1
+0.1
+0.2
nitrogen source
Glucuronamide (N)
-0.0
-0.2
+0.4
+0.4
+0.0
carbon source
pyruvate (C)
-0.1
+0.3
+0.0
+0.4
-0.1
nitrogen source
Casamino Acids (N)
+0.0
+0.1
+0.3
+0.4
-0.0
carbon source
L-Proline (C)
-0.0
+0.2
+0.0
+0.4
+0.2
stress
Spectinomycin 0.04 mg/ml
+0.1
+0.1
+0.4
+0.3
-0.0
carbon source
D-Cellobiose (C)
+0.1
+0.5
+0.2
+0.5
-0.1
carbon source
D-Fructose (C)
-0.1
-0.2
+1.2
+0.5
+0.2
carbon source
D-Fructose (C)
+0.0
+0.0
+1.3
+0.2
+0.4
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