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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS01185 and ABZR86_RS01190 are separated by 208 nucleotides
ABZR86_RS01190 and ABZR86_RS01195 are separated by 186 nucleotides
ABZR86_RS01195 and ABZR86_RS01200 are separated by 247 nucleotides
ABZR86_RS01200 and ABZR86_RS01205 are separated by 61 nucleotides
ABZR86_RS01185: ABZR86_RS01185 - OmpA family protein, at 244,574 to 245,395
_RS01185
ABZR86_RS01190: ABZR86_RS01190 - alginate lyase family protein, at 245,604 to 246,806
_RS01190
ABZR86_RS01195: ABZR86_RS01195 - RICIN domain-containing protein, at 246,993 to 248,540
_RS01195
ABZR86_RS01200: ABZR86_RS01200 - sugar porter family MFS transporter, at 248,788 to 250,179
_RS01200
ABZR86_RS01205: ABZR86_RS01205 - D-galactanolactonase
(from data)
, at 250,241 to 251,143
_RS01205
Group
Condition
ABZR86
_RS01185
ABZR86
_RS01190
ABZR86
_RS01195
ABZR86
_RS01200
ABZR86
_RS01205
carbon source
D-Galactose (C)
-0.4
+0.1
-0.1
-0.7
-4.2
stress
Zinc 2.5 mM
-0.7
-0.2
-0.2
-0.0
+0.1
stress
Dimethyl Sulfoxide 7.5 vol%
-0.6
+0.0
-0.1
-0.1
+0.1
stress
Thallium(I) acetate 0.008 mg/ml
-0.4
-0.0
-0.1
+0.1
-0.1
carbon source
D-Maltose (C)
-0.4
+0.0
-0.0
-0.2
+0.0
stress
Sisomicin 0.016 mg/ml
-0.1
+0.1
-0.1
+0.0
-0.3
nitrogen source
L-Asparagine (N)
-0.5
-0.2
+0.1
-0.1
+0.1
carbon source
D-Glucose (C)
-0.2
-0.0
-0.0
-0.3
+0.2
carbon source
a-Cyclodextrin (C)
-0.1
-0.1
-0.0
-0.2
+0.1
stress
Nalidixic 0.02 mg/ml
-0.3
+0.0
-0.1
+0.2
-0.1
stress
Chloramphenicol 0.008 mg/ml
+0.0
-0.3
-0.0
-0.1
+0.1
stress
A22 0.02 mg/ml
-0.3
+0.1
-0.1
-0.1
+0.1
carbon source
NAG (C)
-0.1
+0.2
-0.1
-0.1
-0.1
stress
Chlorite 0.32 mM
+0.1
-0.0
-0.1
+0.5
-0.6
nitrogen source
nitrate (N)
+0.2
-0.1
+0.1
-0.0
-0.3
carbon source
pyruvate (C)
-0.3
+0.1
+0.1
-0.0
-0.1
stress
Chloramphenicol 0.012 mg/ml
-0.5
+0.1
-0.1
+0.3
+0.1
stress
perchlorate 75 mM
+0.1
-0.0
-0.1
+0.2
-0.3
nitrogen source
Glucuronamide (N)
+0.0
-0.0
-0.0
-0.2
+0.4
carbon source
pyruvate (C)
+0.1
-0.1
-0.1
+0.3
+0.0
nitrogen source
Casamino Acids (N)
-0.2
+0.0
+0.0
+0.1
+0.3
carbon source
a-Cyclodextrin (C)
+0.1
+0.3
+0.0
-0.1
+0.1
carbon source
L-Alanine (C)
+0.0
+0.3
-0.0
+0.3
-0.1
stress
Nalidixic 0.08 mg/ml
+0.2
-0.1
+0.1
+0.3
+0.1
lb
LB
+0.1
+0.0
-0.1
+0.2
+0.5
carbon source
D-Cellobiose (C)
-0.1
-0.0
+0.1
+0.5
+0.2
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.1
+0.0
-0.0
+0.3
+0.3
stress
Spectinomycin 0.04 mg/ml
+0.3
-0.1
+0.1
+0.1
+0.4
carbon source
D-Fructose (C)
+0.2
+0.0
-0.1
-0.2
+1.2
carbon source
D-Fructose (C)
-0.3
+0.2
+0.0
+0.0
+1.3
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ABZR86_RS01195
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