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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS00450 and ABZR86_RS00455 are separated by 1 nucleotides
ABZR86_RS00455 and ABZR86_RS00460 are separated by 421 nucleotides
ABZR86_RS00460 and ABZR86_RS00465 are separated by 217 nucleotides
ABZR86_RS00465 and ABZR86_RS00470 are separated by 140 nucleotides
ABZR86_RS00450: ABZR86_RS00450 - dicarboxylate/amino acid:cation symporter, at 85,542 to 86,810
_RS00450
ABZR86_RS00455: ABZR86_RS00455 - cytochrome c, at 86,812 to 87,621
_RS00455
ABZR86_RS00460: ABZR86_RS00460 - nicotinate phosphoribosyltransferase, at 88,043 to 89,236
_RS00460
ABZR86_RS00465: ABZR86_RS00465 - MetQ/NlpA family ABC transporter substrate-binding protein, at 89,454 to 90,257
_RS00465
ABZR86_RS00470: ABZR86_RS00470 - methionine ABC transporter permease, at 90,398 to 91,087
_RS00470
Group
Condition
ABZR86
_RS00450
ABZR86
_RS00455
ABZR86
_RS00460
ABZR86
_RS00465
ABZR86
_RS00470
carbon source
L-Alanine (C)
-0.0
-0.1
-1.2
-1.0
-1.1
carbon source
L-Alanine (C)
-0.1
-0.2
-1.0
-0.8
-1.3
carbon source
L-Proline (C)
-0.0
-0.1
-1.3
-0.1
-0.1
carbon source
L-Proline (C)
-0.1
+0.0
-1.4
+0.0
+0.0
carbon source
D-Fructose (C)
-0.2
-0.4
-0.5
+0.2
-0.4
nitrogen source
L-Leucine (N)
-0.0
+0.0
-0.0
-0.5
-0.7
stress
Spectinomycin 0.04 mg/ml
-0.1
-0.2
-0.3
-0.1
-0.3
stress
Chlorite 0.32 mM
-0.2
-0.0
+0.2
-0.3
-0.5
carbon source
D-Fructose (C)
+0.1
-0.1
-0.5
+0.1
-0.2
nitrogen source
Casamino Acids (N)
+0.0
-0.0
-0.3
-0.1
-0.3
nitrogen source
L-Asparagine (N)
+0.3
+0.0
-0.1
-0.6
-0.2
carbon source
D-Maltose (C)
-0.2
+0.0
+0.0
-0.1
-0.2
carbon source
a-Cyclodextrin (C)
-0.1
-0.0
-0.1
-0.4
+0.1
nitrogen source
D-Glucosamine Hydrochloride (N)
+0.1
+0.0
-0.4
-0.0
-0.2
nitrogen source
N-Acetyl-D-glucosamine (N)
+0.1
-0.1
-0.1
-0.1
-0.3
carbon source
pyruvate (C)
+0.1
-0.1
-0.2
-0.0
-0.2
nitrogen source
L-Arginine (N)
+0.0
-0.1
-0.1
+0.1
-0.4
stress
Cisplatin 0.0032 mg/ml
-0.1
-0.4
+0.0
+0.1
-0.0
stress
Chloramphenicol 0.008 mg/ml
-0.1
-0.2
-0.1
+0.1
-0.0
carbon source
D-Galactose (C)
+0.0
-0.1
+0.7
-0.4
-0.4
carbon source
D-Glucose (C)
-0.2
-0.1
+0.2
-0.0
-0.0
stress
Paraquat dichloride 0.1 mg/ml
-0.1
-0.1
-0.0
+0.3
-0.2
stress
Fusidic 0.2 mg/ml
-0.1
+0.1
-0.1
+0.3
-0.3
stress
Tetracycline 0.024 mg/ml
+0.2
+0.2
-0.5
+0.2
-0.1
carbon source
NAG (C)
+0.2
-0.1
-0.1
+0.1
-0.2
stress
Zinc 2.5 mM
-0.2
+0.2
+0.0
+0.2
-0.0
nitrogen source
L-Isoleucine (N)
-0.0
-0.1
+0.5
-0.0
-0.1
stress
Chloramphenicol 0.012 mg/ml
+0.1
+0.0
-0.3
+0.3
+0.1
lb
LB
+0.0
-0.2
-0.0
+0.2
+0.2
stress
Sisomicin 0.016 mg/ml
+0.1
+0.1
+0.3
+0.3
-0.2
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