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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS00280 and ABZR86_RS00285 are separated by 184 nucleotides
ABZR86_RS00285 and ABZR86_RS00290 are separated by 139 nucleotides
ABZR86_RS00290 and ABZR86_RS00295 are separated by 174 nucleotides
ABZR86_RS00295 and ABZR86_RS00300 are separated by 13 nucleotides
ABZR86_RS00280: ABZR86_RS00280 - DUF3761 domain-containing protein, at 52,052 to 52,567
_RS00280
ABZR86_RS00285: ABZR86_RS00285 - hypothetical protein, at 52,752 to 53,069
_RS00285
ABZR86_RS00290: ABZR86_RS00290 - CocE/NonD family hydrolase, at 53,209 to 55,146
_RS00290
ABZR86_RS00295: ABZR86_RS00295 - GyrI-like domain-containing protein, at 55,321 to 55,464
_RS00295
ABZR86_RS00300: ABZR86_RS00300 - DUF3772 domain-containing protein, at 55,478 to 57,922
_RS00300
Group
Condition
ABZR86
_RS00280
ABZR86
_RS00285
ABZR86
_RS00290
ABZR86
_RS00295
ABZR86
_RS00300
nitrogen source
L-Asparagine (N)
+0.6
-6.4
-0.1
N.D.
+0.3
carbon source
D-Fructose (C)
-0.5
-2.4
-0.7
N.D.
-0.2
carbon source
D-Maltose (C)
-0.6
-1.5
-0.2
N.D.
-0.3
carbon source
D-Cellobiose (C)
-0.8
-1.0
-0.3
N.D.
-0.2
nitrogen source
L-Lysine (N)
-0.5
-1.0
-0.3
N.D.
-0.4
stress
Thallium(I) acetate 0.016 mg/ml
-0.2
-0.4
-0.5
N.D.
-0.5
carbon source
pyruvate (C)
-0.5
-0.7
-0.2
N.D.
-0.3
carbon source
NAG (C)
-0.6
+0.8
-0.3
N.D.
-0.3
stress
Fusidic 0.2 mg/ml
+0.1
+0.7
+0.1
N.D.
-0.4
stress
Paraquat dichloride 0.05 mg/ml
-0.1
+0.7
+0.2
N.D.
+0.4
stress
Paraquat dichloride 0.1 mg/ml
+0.4
+0.4
+0.3
N.D.
+0.2
lb
LB
+0.1
+0.8
+0.2
N.D.
+0.2
stress
nitrite 6 mM
+0.2
+0.8
+0.2
N.D.
+0.2
stress
Carbenicillin 0.04 mg/ml
+0.3
+0.7
+0.3
N.D.
+0.2
lb
LB
-0.2
+1.3
+0.3
N.D.
+0.1
stress
Tetracycline 0.024 mg/ml
+0.2
+0.6
+0.4
N.D.
+0.4
stress
Nalidixic 0.08 mg/ml
+0.3
+0.6
+0.2
N.D.
+0.5
carbon source
L-Alanine (C)
+0.3
+0.7
+0.3
N.D.
+0.3
stress
sodium fluoride 40 mM
+0.3
+0.6
+0.4
N.D.
+0.4
stress
A22 0.01 mg/ml
+0.2
+0.8
+0.2
N.D.
+0.4
stress
Zinc 2.5 mM
+0.0
+1.1
+0.4
N.D.
+0.1
stress
A22 0.02 mg/ml
+0.4
+0.6
+0.3
N.D.
+0.4
stress
Chloramphenicol 0.012 mg/ml
+0.2
+0.9
+0.2
N.D.
+0.3
stress
D-Cycloserine 0.032 mg/ml
+0.3
+0.8
+0.4
N.D.
+0.3
stress
Chlorite 0.32 mM
+0.3
+1.0
+0.4
N.D.
+0.2
stress
Chloride 250 mM
+0.2
+1.3
+0.3
N.D.
+0.4
carbon source
NAG (C)
+0.6
+0.9
+0.4
N.D.
+0.3
stress
Spectinomycin 0.04 mg/ml
+0.5
+0.8
+0.3
N.D.
+0.6
carbon source
L-Proline (C)
+0.5
+0.9
+0.5
N.D.
+0.3
lb
LB
+0.5
+1.3
+0.3
N.D.
+0.4
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