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Cofit
Protein
Homologs
Fitness for 5 genes in
Dyella japonica UNC79MFTsu3.2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABZR86_RS00255 and ABZR86_RS00260 are separated by 135 nucleotides
ABZR86_RS00260 and ABZR86_RS00265 are separated by 142 nucleotides
ABZR86_RS00265 and ABZR86_RS00270 are separated by 95 nucleotides
ABZR86_RS00270 and ABZR86_RS00275 are separated by 63 nucleotides
ABZR86_RS00255: ABZR86_RS00255 - LLM class flavin-dependent oxidoreductase, at 45,124 to 46,122
_RS00255
ABZR86_RS00260: ABZR86_RS00260 - DUF72 domain-containing protein, at 46,258 to 47,088
_RS00260
ABZR86_RS00265: ABZR86_RS00265 - PD40 domain-containing protein, at 47,231 to 48,214
_RS00265
ABZR86_RS00270: ABZR86_RS00270 - serine hydrolase, at 48,310 to 49,953
_RS00270
ABZR86_RS00275: ABZR86_RS00275 - alpha/beta hydrolase-fold protein, at 50,017 to 51,636
_RS00275
Group
Condition
ABZR86
_RS00255
ABZR86
_RS00260
ABZR86
_RS00265
ABZR86
_RS00270
ABZR86
_RS00275
stress
Thallium(I) acetate 0.016 mg/ml
-0.5
-0.4
-0.5
-0.5
-0.7
stress
Nalidixic 0.01 mg/ml
-0.4
-0.4
-0.2
-0.4
-0.5
nitrogen source
L-Lysine (N)
-0.3
-0.2
-0.6
-0.3
-0.5
carbon source
D-Cellobiose (C)
-0.4
-0.2
-0.4
-0.2
-0.4
carbon source
D-Glucose (C)
-0.2
-0.2
-0.4
-0.2
-0.4
nitrogen source
nitrate (N)
-0.0
-0.3
-0.1
-0.5
-0.4
stress
Ceftazidime 0.1 mg/ml
-0.4
-0.1
-0.1
-0.2
-0.3
carbon source
D-Fructose (C)
+0.1
+0.1
-0.6
+0.2
-0.5
carbon source
D-Fructose (C)
+0.1
+0.2
-0.3
-0.1
-0.3
stress
Thallium(I) acetate 0.008 mg/ml
-0.5
+0.1
+0.1
+0.2
+0.3
carbon source
L-Proline (C)
+0.2
+0.4
-0.2
+0.0
-0.1
nitrogen source
L-Proline (N)
-0.4
-0.0
+0.5
+0.1
+0.1
stress
perchlorate 75 mM
-0.4
+0.0
+0.3
+0.4
+0.1
lb
LB
+0.6
-0.0
+0.1
-0.2
+0.1
stress
Zinc 2.5 mM
+0.3
+0.2
-0.2
+0.2
+0.1
carbon source
L-Alanine (C)
+0.3
+0.3
-0.2
+0.1
+0.1
stress
Chloramphenicol 0.012 mg/ml
-0.1
+0.1
-0.0
+0.3
+0.4
stress
Sisomicin 0.016 mg/ml
-0.1
+0.2
+0.2
+0.3
+0.2
stress
A22 0.02 mg/ml
+0.3
+0.2
+0.1
+0.2
+0.1
stress
D-Cycloserine 0.032 mg/ml
+0.0
+0.2
+0.5
+0.1
+0.2
carbon source
a-Cyclodextrin (C)
+0.2
+0.2
+0.2
+0.2
+0.3
stress
sodium fluoride 40 mM
-0.0
+0.3
+0.3
+0.3
+0.3
stress
Chloramphenicol 0.008 mg/ml
+0.2
+0.1
+0.3
+0.5
+0.1
stress
Carbenicillin 0.02 mg/ml
+0.4
-0.1
+0.3
+0.2
+0.4
carbon source
NAG (C)
+0.5
+0.2
-0.0
+0.3
+0.4
stress
Tetracycline 0.024 mg/ml
+0.1
+0.3
+0.5
+0.4
+0.2
lb
LB
+0.4
+0.1
+0.3
+0.4
+0.4
stress
Nalidixic 0.08 mg/ml
+0.5
+0.4
+0.5
+0.3
+0.2
nitrogen source
L-Asparagine (N)
+0.3
+0.4
+0.3
+0.4
+0.4
carbon source
L-Proline (C)
+0.5
+0.4
+0.3
+0.4
+0.5
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