Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_006447	ABIE53_006448	ABIE53_006449	ABIE53_006450	ABIE53_006451
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	-0.2	+0.0	-1.4	-0.6
carbon source	butyrate (C)	-0.4	-0.0	-0.1	-2.3	-0.1
stress	RCH2_defined_glucose_5mM with Ferulic Acid 5 mM	-0.5	-0.2	-0.1	-2.0	-0.1
carbon source	Cinnamic and Ethanols	-0.5	-0.1	-0.2	-1.7	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	+0.2	+0.0	-2.8	-0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	+0.2	+0.2	-1.7	-0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	+0.5	-0.0	-2.4	-0.3
carbon source	Ethanol (C)	-0.1	+0.0	-0.1	-2.1	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	+0.1	-0.1	-2.0	-0.2
soil extract	Indole-3-pyruvic 5 mM in soil extract	-0.7	-0.2	+0.1	-1.1	-0.6
stress	RCH2_defined_glucose_5mM with Salicylic 5 mM	-0.4	+0.0	+0.2	-1.5	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	+0.3	+0.3	-1.6	-0.8
r2a outgrowth control	R2A outgrowth control	-0.6	-0.1	+0.1	-1.2	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.3	-0.0	-1.9	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.1	+0.3	-1.9	-0.5
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	-0.7	+0.3	+0.2	-1.4	-0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.6	+0.1	+0.1	-1.4	-0.2
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.1	+0.1	+0.2	-2.1	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	+0.4	+0.2	-1.6	-0.4
carbon source	D-Lactate (C)	-0.8	-0.0	+0.2	-1.3	+0.1
carbon source	4-Hydroxybenzoic Acid (C)	-0.7	-0.4	-0.6	+0.3	-0.3
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM	+0.3	+0.1	-0.0	-1.5	-0.3
stress	R2A with Chloride 200 mM	-0.4	+0.1	-0.0	-1.5	+0.3
plant outgrowth control	Plant outgrowth control	+0.5	-0.7	+0.0	-0.9	-0.2
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	-0.6	+0.4	+0.2	-0.6	-0.7
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.4	+0.2	+0.1	-1.5	-0.3
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	-0.4	+0.5	+0.2	-0.9	-0.5
carbon source	D,L-Malic Acid (C)	+0.3	+0.1	+0.1	-1.7	+0.6
soil extract	Adenine 5 mM in soil extract	+1.1	-0.6	-0.2	+0.8	+0.3
carbon source	D-Mannose (C)	+0.9	+0.0	-0.1	+1.1	+0.8