Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_006391 and ABIE53_006392 are separated by 44 nucleotidesABIE53_006392 and ABIE53_006393 are separated by 4 nucleotidesABIE53_006393 and ABIE53_006394 are separated by 38 nucleotidesABIE53_006394 and ABIE53_006395 are separated by 31 nucleotides ABIE53_006391: ABIE53_006391 - pimeloyl-ACP methyl ester carboxylesterase, at 2,768,476 to 2,770,812 _006391 ABIE53_006392: ABIE53_006392 - phosphate acetyltransferase, at 2,770,857 to 2,771,795 _006392 ABIE53_006393: ABIE53_006393 - acetate kinase, at 2,771,800 to 2,772,987 _006393 ABIE53_006394: ABIE53_006394 - enoyl-[acyl-carrier protein] reductase I, at 2,773,026 to 2,773,808 _006394 ABIE53_006395: ABIE53_006395 - hypothetical protein, at 2,773,840 to 2,774,100 _006395
Group Condition ABIE53_006391 ABIE53_006392 ABIE53_006393 ABIE53_006394 ABIE53_006395
stress R2A with Ethanol 2.5 vol% -0.2 -2.1 +0.3 -0.5 N.D.
plant outgrowth control Plant outgrowth control -0.6 +0.2 -0.4 -1.3 N.D.
r2a outgrowth control R2A outgrowth control -0.1 -1.1 -0.4 -0.3 N.D.
plant outgrowth control Plant outgrowth control -0.1 -0.8 -0.1 -0.8 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 +0.3 -0.2 -1.7 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -1.0 +0.3 -0.9 N.D.
carbon source butyrate (C) +0.1 -0.8 -0.1 -0.8 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -1.0 -0.6 +0.3 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.3 -1.4 +0.3 -0.6 N.D.
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.4 -0.2 -0.3 -1.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.4 -0.2 -0.8 N.D.
stress R2A with Propan-1-ol 13 g/L +0.2 +0.3 +0.3 -1.7 N.D.
carbon source D-Sorbitol (C) +0.5 -0.6 +0.3 -0.8 N.D.
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.3 -1.7 +0.2 +0.7 N.D.
stress R2A with Chloride 200 mM +0.0 -0.8 -0.2 +0.9 N.D.
carbon source D-Galactose (C) +0.5 +0.4 +0.1 -0.8 N.D.
plant outgrowth control Plant outgrowth control +0.3 +0.7 +0.1 -0.8 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.1 +1.2 -0.3 -0.4 N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.2 -0.8 +0.3 +0.8 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.9 +0.0 -0.7 N.D.
stress M9 with Chloride 200 mM -0.1 +0.6 -0.4 +0.8 N.D.
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.2 +0.2 -0.6 +1.6 N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.5 -0.5 +0.5 +1.0 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.9 +0.1 +0.8 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.1 +0.7 -0.3 +1.3 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.4 +1.3 -0.5 +0.9 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +2.3 +0.3 -0.2 N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.2 +2.5 -0.6 +0.1 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +2.7 -0.3 -0.3 N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +3.9 -0.2 -0.3 N.D.
remove
ABIE53_006391
plot		 remove
ABIE53_006392
plot		 remove
ABIE53_006393		 remove
ABIE53_006394
plot		 remove
ABIE53_006395
plot