Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_006363 and ABIE53_006364 are separated by 92 nucleotidesABIE53_006364 and ABIE53_006365 are separated by 27 nucleotidesABIE53_006365 and ABIE53_006366 are separated by 40 nucleotidesABIE53_006366 and ABIE53_006367 are separated by 94 nucleotides ABIE53_006363: ABIE53_006363 - uncharacterized protein YciI, at 2,732,005 to 2,732,289 _006363 ABIE53_006364: ABIE53_006364 - NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family), at 2,732,382 to 2,733,185 _006364 ABIE53_006365: ABIE53_006365 - hypothetical protein, at 2,733,213 to 2,733,449 _006365 ABIE53_006366: ABIE53_006366 - myo-inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase, at 2,733,490 to 2,734,482 _006366 ABIE53_006367: ABIE53_006367 - DNA-binding transcriptional LysR family regulator, at 2,734,577 to 2,735,485 _006367
Group Condition ABIE53_006363 ABIE53_006364 ABIE53_006365 ABIE53_006366 ABIE53_006367
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.1 -1.2 -1.4 -0.8 -0.1
stress R2A with Chloride 200 mM -3.5 -0.0 -2.6 -0.2 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 +0.3 -5.0 +0.1 -0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -0.1 -3.7 -0.3 -0.3
plant outgrowth control Plant outgrowth control -3.9 -1.6 +0.1 +0.7 -0.3
plant outgrowth control Plant outgrowth control -2.9 -0.5 -0.7 +0.3 -0.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +0.6 -4.2 +0.2 -1.7
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -3.4 -0.4 -0.4 +0.1 +0.2
plant outgrowth control Plant outgrowth control -4.2 +0.5 +0.6 -0.0 -0.7
stress RCH2_defined_glucose_5mM with Sucrose 5 mM -4.0 -0.1 -0.2 +0.6 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -0.3 -1.4 -1.0 +1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.6 +0.2 -3.6 -0.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.8 -0.6 -1.5 +0.3 +0.4
stress RCH2_defined_glucose_5mM with Cinnamic 5 mM -1.8 +0.4 -0.9 -0.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.0 -0.2 -1.0 -0.0 +0.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 -0.6 -2.8 +0.6 -0.3
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.7 +1.1 -1.7 +0.3 -1.0
nitrogen source histamine 2mM N source +0.5 -0.4 -2.0 -0.3 +0.6
stress RCH2_defined_glucose_5mM with Adenine 5 mM -2.2 -0.0 +1.2 -0.2 -0.4
r2a outgrowth control R2A outgrowth control -2.0 -0.2 +1.2 -0.2 -0.3
stress R2A with Propan-1-ol 13 g/L +1.5 -0.4 -1.9 -0.5 +0.1
stress R2A with Tricalcium phosphate 0.5 g/L -1.6 -0.1 +1.3 +0.2 -0.8
carbon source Acetylated xylan 10 g/L (C) -1.9 +0.6 +1.0 +0.3 -0.8
carbon source Shikimic Acid 5 mM (C) -2.3 +0.4 +1.3 +0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.6 -0.3 +0.6 +0.5 +0.7
r2a outgrowth control R2A outgrowth control +1.1 +0.2 -2.5 +0.4 +0.8
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +2.0 +0.7 -1.3 +0.1 +0.5
stress R2A with Propan-1-ol 13 g/L +1.5 +0.5 +1.0 +0.4 -0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.5 +0.5 +0.2 -0.0 +1.5
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +1.1 +0.5 +1.6 +0.5 +1.2
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