Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABIE53_006351	ABIE53_006352	ABIE53_006353	ABIE53_006354	ABIE53_006355
r2a outgrowth control	R2A outgrowth control	-0.1	-0.1	-4.2	-0.8	-0.3
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-0.5	-3.2	-0.6	-0.6
stress	M9 with Chloride 200 mM	-0.5	-0.9	-2.1	-0.4	-0.4
plant outgrowth control	Plant outgrowth control	-0.7	-0.5	-0.7	-2.1	-0.1
stress	R2A with Propan-1-ol 13 g/L	-0.1	-0.0	-2.1	-1.3	-0.4
stress	R2A with Isopropyl alcohol 21 g/L	-0.4	-0.7	-1.7	-0.2	-1.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-0.4	-1.5	-0.8	-1.0
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	-0.4	-0.1	-2.1	-0.5	-0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	-0.8	-0.7	-0.4	-1.1
stress	R2A with Chloride 200 mM	-0.3	-0.0	-2.4	+0.0	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-0.1	-0.5	-0.9	-1.1
r2a outgrowth control	R2A outgrowth control	-0.1	-0.1	-2.5	-0.2	-0.1
stress	R2A with N-decanoyl-DL-Homoserine lactone 10 uM	-0.1	-0.1	-2.1	-0.8	+0.2
biofilm	biofilm; planktonic cells from 96 well plate assay in R2A with C30 compound	+0.2	-0.1	-3.0	-0.3	+0.3
carbon source	D-Lactate (C)	+0.0	+0.4	-3.2	+0.3	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.0	+0.1	-2.5	+0.4	-0.7
nitrogen source	histamine 2mM N source	+0.5	-0.4	-1.8	-0.4	-0.4
carbon source	Beta-Lactose (C)	+0.0	+0.2	-2.6	+0.2	-0.3
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	+0.4	+0.2	-3.0	+0.1	+0.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	-0.0	-2.2	+0.4	-0.7
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	+0.4	-2.1	+0.4	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	-0.2	+0.8	-1.5	-0.3
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+1.0	+0.1	-1.5	-0.3	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+1.1	+0.3	-1.8	+0.4	-0.3
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.8	+0.1	-2.4	+1.1	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.3	-0.9	+1.8	-1.2	-0.0
carbon source	Laminarin 10 g/L (C)	+0.9	-0.4	+1.7	-0.7	-0.4
carbon source	Tween 20 (C)	+0.3	+0.2	+1.7	-0.4	+0.3
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.6	-0.2	+1.6	+0.9	+0.2
stress	M9 with Chloride 200 mM	+0.0	+0.2	+2.1	+0.3	+0.8