Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_006275	ABIE53_006276	ABIE53_006277	ABIE53_006278	ABIE53_006279
plant outgrowth control	Plant outgrowth control	+0.1	-3.6	-2.7	-0.3	-0.9
stress	R2A with 3-methyl-3-butenol 4.5 g/L	-0.4	-1.3	-3.2	+0.2	+0.2
plant outgrowth control	Plant outgrowth control	+0.4	-2.4	+0.2	-0.3	-2.3
plant outgrowth control	Plant outgrowth control	+0.2	-2.6	-0.5	-0.1	-1.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.8	-1.7	-0.5	-2.5
stress	M9 with Ethanol 2.5 vol%	+0.3	-0.1	-4.9	-0.0	+0.6
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-1.2	-3.1	-0.2	+0.6
soil extract	D,L-Malic Acid 5 mM in soil extract	-0.4	-1.3	-2.0	+0.0	+0.3
plant outgrowth control	Plant outgrowth control	-0.4	+0.6	-1.5	-0.5	-1.5
stress	R2A with Ethanol 2.5 vol%	+0.1	+0.0	-4.1	+0.1	+0.7
stress	RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM	-2.0	+0.7	-1.2	+0.2	-0.5
stress	R2A with Propan-1-ol 13 g/L	+0.0	+0.9	-3.4	+0.2	-0.5
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.0	-0.8	-1.7	+0.5	-0.8
r2a outgrowth control	R2A outgrowth control	-0.9	+0.8	-1.3	+0.4	-1.7
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.7	-2.0	+0.7	+0.4	-0.8
plant outgrowth control	Plant outgrowth control	-0.1	-1.1	+1.0	-0.3	-1.6
stress	R2A with Isopropyl alcohol 21 g/L	+0.3	+0.3	-2.7	+0.5	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.0	+2.0	-1.7	-0.4	-0.5
stress	M9 with 3-methyl-2-butenol 2 g/L	-0.3	-0.4	-2.5	+0.7	+1.3
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.0	-1.8	+1.5	-0.2	-0.7
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	+1.0	-1.0	+0.6	-1.0
stress	R2A with Tricalcium phosphate 0.5 g/L	+0.2	-0.3	+1.6	-0.8	-1.2
stress	M9 with 3-methyl-2-butenol 2 g/L	-0.1	-0.8	-1.5	+0.7	+1.3
stress	M9 with Ethanol 2.5 vol%	-0.8	+0.9	+1.2	+0.4	-0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.1	+0.8	+2.0	-0.3	-0.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.1	-0.4	+2.8	-0.4	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.6	-0.3	+2.2	+0.2	-1.0
carbon source	D-Glucose-6-Phosphate (C)	+0.2	-1.5	+1.4	+0.6	+1.2
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-1.5	+0.9	+1.9	+1.1	+0.3
carbon source	D-Fructose (C)	-0.0	-0.7	+1.7	+0.6	+1.2