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Cofit
Protein
Homologs
Fitness for 5 genes in
Paraburkholderia graminis OAS925
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ABIE53_006181 and ABIE53_006182 are separated by 102 nucleotides
ABIE53_006182 and ABIE53_006183 overlap by 4 nucleotides
ABIE53_006183 and ABIE53_006184 overlap by 4 nucleotides
ABIE53_006184 and ABIE53_006185 are separated by 2 nucleotides
ABIE53_006181: ABIE53_006181 - hypothetical protein, at 2,542,110 to 2,542,670
_006181
ABIE53_006182: ABIE53_006182 - uroporphyrin-III C-methyltransferase, at 2,542,773 to 2,543,543
_006182
ABIE53_006183: ABIE53_006183 - cobalt-precorrin 5A hydrolase, at 2,543,540 to 2,543,971
_006183
ABIE53_006184: ABIE53_006184 - cob(I)alamin adenosyltransferase, at 2,543,968 to 2,544,570
_006184
ABIE53_006185: ABIE53_006185 - cobyrinic acid a,c-diamide synthase, at 2,544,573 to 2,545,871
_006185
Group
Condition
ABIE53
_006181
ABIE53
_006182
ABIE53
_006183
ABIE53
_006184
ABIE53
_006185
stress
M9 with PEG 6000 16 vol%
-0.9
-0.8
-1.4
-4.7
-3.5
stress
M9 with 3-methyl-3-butenol 4.5 g/L
-0.5
-0.6
-1.2
-4.9
-3.9
stress
M9 with 3-methyl-3-butenol 4.5 g/L
-0.7
-0.8
-1.5
-4.5
-3.5
m9 no stress control
M9 no stress control
-0.4
-0.7
-0.9
-4.4
-4.1
stress
M9 with 3-methyl-2-butenol 2 g/L
-0.8
-0.9
-1.0
-3.9
-3.7
stress
M9 with Propan-1-ol 13 g/L
-0.2
-0.9
-1.1
-4.2
-3.8
stress
M9 with Propan-1-ol 13 g/L
-0.3
-0.6
-0.7
-4.4
-4.0
stress
M9 with 3-methyl-2-butenol 2 g/L
-1.0
-0.9
-0.6
-3.8
-3.6
m9 no stress control
M9 no stress control
-0.9
-0.9
-0.2
-4.7
-3.1
stress
M9 with Isopropyl alcohol 21 g/L
-0.4
-0.7
-0.6
-5.0
-3.0
stress
M9 with PEG 6000 16 vol%
-0.5
-0.6
-0.7
-4.5
-3.5
stress
M9 with 3-methyl-2-butenol 2 g/L
-0.9
-0.9
+0.2
-4.0
-4.1
stress
M9 with Isopropyl alcohol 21 g/L
-0.9
-0.7
-0.3
-4.2
-3.6
stress
M9 with Propan-1-ol 13 g/L
-0.6
-0.3
-0.6
-4.5
-3.5
stress
M9 with 3-methyl-3-butenol 4.5 g/L
-0.7
-0.7
-0.3
-4.0
-3.8
stress
M9 with PEG 6000 16 vol%
-0.3
-0.9
+0.1
-4.9
-3.5
stress
M9 with Isopropyl alcohol 21 g/L
-0.4
-0.7
-0.1
-4.2
-3.9
m9 no stress control
M9 no stress control
-0.6
-1.0
-0.4
-3.0
-4.1
stress
M9 with Isopropyl alcohol 21 g/L
-0.7
-0.6
-0.4
-3.3
-4.1
m9 no stress control
M9 no stress control
-0.8
-1.1
-0.9
-2.2
-3.7
stress
M9 with 3-methyl-3-butenol 4.5 g/L
-0.4
-0.3
+0.2
-4.3
-3.8
stress
M9 with PEG 6000 16 vol%
-0.5
-0.4
-0.7
-3.3
-3.5
stress
M9 with 3-methyl-2-butenol 2 g/L
-0.8
-0.6
+0.1
-4.2
-2.9
stress
M9 with Propan-1-ol 13 g/L
-0.9
-0.5
-0.2
-3.6
-2.7
stress
M9 with Chloride 200 mM
-1.0
-0.2
-2.4
-1.6
-2.3
stress
M9 with Ethanol 2.5 vol%
-0.2
-0.3
-1.1
-3.2
-2.6
stress
M9 with Ethanol 2.5 vol%
-0.4
-0.4
-0.5
-2.5
-2.2
stress
M9 with Ethanol 2.5 vol%
-0.5
-0.6
-0.1
-2.4
-2.4
stress
M9 with Ethanol 2.5 vol%
-0.1
-0.3
+0.3
-3.6
-2.0
in planta
Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
+0.1
-0.4
+3.6
-1.6
-1.4
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