Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_006171 and ABIE53_006172 are separated by 6 nucleotidesABIE53_006172 and ABIE53_006173 are separated by 158 nucleotidesABIE53_006173 and ABIE53_006174 are separated by 601 nucleotidesABIE53_006174 and ABIE53_006175 overlap by 14 nucleotides ABIE53_006171: ABIE53_006171 - HAD superfamily hydrolase (TIGR01509 family), at 2,521,285 to 2,521,974 _006171 ABIE53_006172: ABIE53_006172 - AhpD family alkylhydroperoxidase, at 2,521,981 to 2,522,373 _006172 ABIE53_006173: ABIE53_006173 - NADH-quinone oxidoreductase subunit M, at 2,522,532 to 2,524,085 _006173 ABIE53_006174: ABIE53_006174 - putative ABC transport system ATP-binding protein, at 2,524,687 to 2,525,436 _006174 ABIE53_006175: ABIE53_006175 - putative ABC transport system permease protein, at 2,525,423 to 2,527,996 _006175
Group Condition ABIE53_006171 ABIE53_006172 ABIE53_006173 ABIE53_006174 ABIE53_006175
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.6 -2.1 +0.1 -1.5 -0.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 -0.7 -0.3 -0.6 -1.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -0.9 -0.9 -1.8 -0.7
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut -0.5 -2.0 +0.1 -1.1 +0.0
plant outgrowth control Plant outgrowth control -0.5 -0.5 -0.1 -1.7 -0.1
carbon source Shikimic Acid 5 mM (C) -0.5 -2.5 +0.1 +0.3 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.5 -0.0 -1.2 -0.4
plant outgrowth control Plant outgrowth control -1.3 -0.5 -0.4 -0.4 -0.1
carbon source Ethanol (C) -0.6 -1.3 -0.1 -0.5 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -2.0 +0.2 -0.0 -0.1
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.5 +0.2 -1.3 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.5 +0.9 -0.1 -1.1 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -1.9 +0.3 -0.3 -0.2
stress R2A with Tricalcium phosphate 0.5 g/L -1.0 -1.6 +0.0 +0.5 +0.0
carbon source Laminarin 10 g/L (C) -0.6 -1.6 +0.1 +0.5 -0.4
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut -0.4 -0.9 +0.3 -1.0 +0.0
carbon source Azelaic 20 mM (C) -0.8 -1.1 +0.4 -0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +0.1 -0.3 -2.0 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -0.5 -0.1 -0.5 +0.6
carbon source Acetylated xylan 10 g/L (C) -0.5 -2.2 -0.2 +1.0 +0.2
stress M9 with Chloride 200 mM -1.2 -1.3 +0.1 +0.5 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -0.5 +0.4 +0.5 -0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -1.1 +0.0 +0.8 +0.1
stress RCH2_defined_glucose_5mM with caffeic 1 mM -1.0 -0.4 -0.1 +1.2 -0.0
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.3 -0.8 -0.4 +1.0 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.1 +0.8 +0.2 +0.5 -0.2
carbon source D-Fructose (C) +1.0 -1.0 -0.1 +1.2 -0.0
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.9 +0.9 +1.0 -1.1 -0.2
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.6 +0.7 -0.0 +1.3 -0.8
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.9 +1.9 -0.3 +0.0 -0.0
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ABIE53_006171
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ABIE53_006172
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ABIE53_006174
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ABIE53_006175
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