Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_006016 and ABIE53_006017 are separated by 35 nucleotidesABIE53_006017 and ABIE53_006018 are separated by 153 nucleotidesABIE53_006018 and ABIE53_006019 overlap by 4 nucleotidesABIE53_006019 and ABIE53_006020 are separated by 318 nucleotides ABIE53_006016: ABIE53_006016 - chromosome segregation ATPase, at 2,338,371 to 2,340,269 _006016 ABIE53_006017: ABIE53_006017 - hypothetical protein, at 2,340,305 to 2,340,625 _006017 ABIE53_006018: ABIE53_006018 - endonuclease/exonuclease/phosphatase family metal-dependent hydrolase, at 2,340,779 to 2,341,555 _006018 ABIE53_006019: ABIE53_006019 - phospholipase D1/2, at 2,341,552 to 2,343,762 _006019 ABIE53_006020: ABIE53_006020 - aldose 1-epimerase, at 2,344,081 to 2,345,346 _006020
Group Condition ABIE53_006016 ABIE53_006017 ABIE53_006018 ABIE53_006019 ABIE53_006020
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.6 -2.6 +0.1 -0.2 -0.2
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.0 -2.4 -0.6 -0.3 +0.2
stress M9 with 3-methyl-2-butenol 2 g/L -0.9 -0.5 -0.5 -0.3 -0.2
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.8 -0.2 -0.5 -0.3 -0.3
stress M9 with Propan-1-ol 13 g/L +0.4 -1.6 -0.2 -0.1 +0.1
stress RCH2_defined_glucose_5mM with Adenine 4 mM -0.4 -1.4 +0.3 -0.0 +0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.1 -1.0 +0.4 +0.0
carbon source D-Lactate (C) -0.1 -1.4 +0.1 +0.2 +0.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.2 -0.5 -0.4 -0.6 +0.8
plant outgrowth control Plant outgrowth control -0.3 -1.5 +0.3 +0.1 +0.3
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.1 -1.1 +0.3 +0.1 -0.3
r2a outgrowth control R2A outgrowth control -0.6 -0.7 +0.9 -0.1 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.4 -0.1 +0.5 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 -0.7 -0.2 -0.3 +0.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +0.1 -0.9 +0.1 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.4 -0.9 +0.4 +0.5
plant outgrowth control Plant outgrowth control -0.8 +0.9 +0.3 -0.0 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 +1.3 -0.4 +0.2 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +1.0 -0.8 +0.3 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.8 +0.6 -0.4 -0.1 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +1.1 -0.4 +0.1 +0.1
plant outgrowth control Plant outgrowth control +0.6 +0.9 -0.5 +0.3 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.4 +0.6 +0.9 -0.1 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +1.3 -0.1 -0.1 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +1.1 +0.0 +0.0 +0.2
plant outgrowth control Plant outgrowth control +0.6 +1.1 +0.0 +0.3 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 +0.4 +0.1 +0.4 +0.3
stress Growth in presence of limonene +0.3 +1.1 +0.6 +0.2 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +1.4 +1.4 +0.2 +0.2 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.2 +1.7 +0.5 +0.2 +0.1
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ABIE53_006017
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ABIE53_006020
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