Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABIE53_006008	ABIE53_006009	ABIE53_006010	ABIE53_006011	ABIE53_006012
carbon source	Azelaic 20 mM (C)	-4.2	-0.2	-0.5	-0.2	-0.6
r2a outgrowth control	R2A outgrowth control	-3.1	-0.5	-0.6	-0.4	-0.9
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	-3.2	-0.1	-0.9	-0.2	-0.0
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	-3.9	-0.1	-0.1	+0.1	-0.6
stress control	RCH2_defined_glucose_5mM with no stress	-3.5	-0.0	-0.3	-0.1	-0.5
plant outgrowth control	Plant outgrowth control	-2.8	-0.1	+0.4	-0.9	-0.8
stress	RCH2_defined_glucose_5mM with Guanine 5 mM	-3.3	+0.2	-0.2	-0.1	-0.5
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-3.2	+0.6	-0.1	-0.2	-0.9
nitrogen source	Ammonium chloride 30 mM (N)	-3.8	-0.2	+0.2	+0.1	+0.1
stress	R2A with Isopropyl alcohol 21 g/L	-1.1	+0.3	-0.8	-0.5	-1.5
soil extract	Adenine 5 mM in soil extract	-3.2	-0.3	-0.3	-0.0	+0.3
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-1.7	-0.2	+0.5	-0.7	-1.2
carbon source	Cinnamic and Ethanols	-2.8	-0.4	+0.6	-0.3	-0.4
soil extract	Adenine 5 mM in soil extract	-3.3	-0.2	-0.2	+0.1	+0.2
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-2.7	+0.2	-0.6	-0.7	+0.6
soil extract	Lumazine 5 mM in soil extract	-3.6	-0.2	+0.3	-0.0	+0.5
soil extract	Sucrose 5 mM in soil extract	-2.4	+0.1	-0.9	-0.1	+0.5
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	-2.6	+0.1	-0.3	-0.6	+0.5
plant outgrowth control	Plant outgrowth control	-1.1	-0.7	+0.9	-0.9	-0.7
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	-2.8	-0.1	+0.3	+0.3	+0.6
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-1.6	-0.4	+0.7	-0.7	+0.7
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-1.3	+0.1	-1.0	-0.4	+1.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+2.2	+0.0	-0.7	-0.2	-1.9
carbon source	Acetylated xylan 10 g/L (C)	+0.5	-1.4	+1.3	+1.0	-0.1
carbon source	Acetylated xylan 10 g/L (C)	+0.9	-1.7	+0.7	+0.7	+1.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+2.0	-0.8	+0.7	+0.1	+0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+1.8	+0.6	+0.8	-0.7	+0.3
carbon source	Laminarin 10 g/L (C)	+2.3	-0.5	+0.6	+0.2	+0.5
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+3.7	+0.1	+0.8	-0.8	+0.3
biofilm	biofilm; planktonic cells from 96 well plate assay in R2A	+2.7	+0.8	+0.1	+0.7	+0.8