Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_005818	ABIE53_005819	ABIE53_005820	ABIE53_005821	ABIE53_005822
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	N.D.	+0.4	-4.3	-0.9
stress	R2A with Chloride 200 mM	N.D.	N.D.	-0.1	-4.1	-0.4
carbon source	shik 5mM	N.D.	N.D.	-0.2	-4.3	+0.0
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	N.D.	+0.2	-4.1	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	N.D.	+0.3	-4.2	-0.2
stress	R2A with Propan-1-ol 13 g/L	N.D.	N.D.	-0.1	-4.3	+0.3
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	N.D.	N.D.	-0.2	-3.6	-0.0
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	N.D.	N.D.	+0.1	-3.4	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	N.D.	N.D.	-0.1	-3.7	+0.0
carbon source	Adenosine (C)	N.D.	N.D.	+0.1	-4.0	+0.2
carbon source	2-Deoxy-D-Ribose (C)	N.D.	N.D.	-0.2	-3.3	-0.1
soil extract	D-Glucose 5 mM in soil extract	N.D.	N.D.	+0.1	-3.7	+0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	N.D.	+0.4	-3.8	+0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	N.D.	+0.2	-2.7	-0.7
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	N.D.	N.D.	-0.2	-2.8	+0.2
carbon source	D-Trehalose (C)	N.D.	N.D.	-0.2	-2.4	-0.2
stress	RCH2_defined_glucose_5mM with Nerolidol 5 mM	N.D.	N.D.	-0.1	-2.6	+0.1
motility_chemotaxis	Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut	N.D.	N.D.	+0.1	-2.6	+0.0
pH	R2A pH 8.3	N.D.	N.D.	+0.2	-2.7	+0.1
stress	Growth in presence of pinene	N.D.	N.D.	+0.2	-2.2	-0.2
stress	Growth in presence of pinene	N.D.	N.D.	+0.3	-2.1	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	N.D.	+0.2	+2.1	+0.5
plant outgrowth control	Plant outgrowth control	N.D.	N.D.	+0.1	+2.4	+0.3
plant outgrowth control	Plant outgrowth control	N.D.	N.D.	+0.5	+1.9	+0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	N.D.	+0.0	+1.9	+1.0
plant outgrowth control	Plant outgrowth control	N.D.	N.D.	+0.2	+2.6	+0.6
carbon source	D-Serine (C)	N.D.	N.D.	-0.2	+8.2	-0.2
carbon source	L-Serine (C)	N.D.	N.D.	-0.1	+8.4	+0.0
carbon source	D-Serine (C)	N.D.	N.D.	-0.2	+8.7	-0.2
carbon source	L-Serine (C)	N.D.	N.D.	+0.1	+8.2	+0.1