Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_005808 and ABIE53_005809 are separated by 478 nucleotidesABIE53_005809 and ABIE53_005810 are separated by 133 nucleotidesABIE53_005810 and ABIE53_005811 are separated by 296 nucleotidesABIE53_005811 and ABIE53_005812 are separated by 143 nucleotides ABIE53_005808: ABIE53_005808 - AraC-like DNA-binding protein, at 2,111,121 to 2,111,858 _005808 ABIE53_005809: ABIE53_005809 - hypothetical protein, at 2,112,337 to 2,113,869 _005809 ABIE53_005810: ABIE53_005810 - glucosamine--fructose-6-phosphate aminotransferase (isomerizing), at 2,114,003 to 2,115,841 _005810 ABIE53_005811: ABIE53_005811 - NAD(P)H dehydrogenase (quinone), at 2,116,138 to 2,117,019 _005811 ABIE53_005812: ABIE53_005812 - glutaminase, at 2,117,163 to 2,118,077 _005812
Group Condition ABIE53_005808 ABIE53_005809 ABIE53_005810 ABIE53_005811 ABIE53_005812
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.9 -0.5 -0.6 -0.7 -0.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.7 -0.6 -0.6 -0.2 -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.0 -0.8 -1.1 -1.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.2 -0.6 -1.6 -0.8
plant outgrowth control Plant outgrowth control -0.4 -0.6 -0.5 -0.7 -0.7
stress R2A with Tricalcium phosphate 0.5 g/L -0.7 -0.4 -0.0 -1.3 -0.3
carbon source homovanillyl alcohol and Ethanols -1.0 -0.3 -0.2 -0.3 -0.9
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.5 -0.6 -1.3 -0.7
carbon source Laminarin 10 g/L (C) -1.3 -0.6 -0.0 +0.0 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.0 -0.4 +0.2 +0.5 -0.1
plant outgrowth control Plant outgrowth control -1.0 -0.4 -0.7 +0.5 -0.3
plant outgrowth control Plant outgrowth control +0.5 -0.5 -0.6 -0.1 -1.0
stress M9 with Isopropyl alcohol 21 g/L -1.3 +0.2 -0.0 -1.1 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +0.2 -0.1 -1.0 -1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.4 +0.0 -0.3 -1.6 +0.5
carbon source D-Mannose (C) +0.9 +0.2 -0.4 -0.4 -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 -0.7 -0.5 -0.5 +0.1
stress M9 with Chloride 200 mM +1.5 -0.1 -0.1 -0.6 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.3 +0.2 +0.8 -1.1
m9 no stress control M9 no stress control +0.6 +0.6 +0.0 -0.9 +0.6
carbon source Tween 20 (C) +1.1 +0.2 +0.0 +0.6 -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 +0.1 +0.4 +1.1 +0.3
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +1.9 +0.6 -0.1 -1.3 +0.4
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.6 +0.5 +0.1 -0.7 +1.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.6 +0.9 +0.1 -0.3 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +1.0 +0.5 +0.3 -0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.8 +0.8 +0.1 +0.1 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.9 +1.6 +0.3 -0.2 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.4 +1.3 +0.4 +0.1 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.4 +0.1 +0.2 +1.4 +0.3
remove
ABIE53_005808
plot		 remove
ABIE53_005809
plot		 remove
ABIE53_005810		 remove
ABIE53_005811
plot		 remove
ABIE53_005812
plot