Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_005637 and ABIE53_005638 are separated by 315 nucleotidesABIE53_005638 and ABIE53_005639 are separated by 47 nucleotidesABIE53_005639 and ABIE53_005640 overlap by 1 nucleotidesABIE53_005640 and ABIE53_005641 are separated by 381 nucleotides ABIE53_005637: ABIE53_005637 - putative zinc-type alcohol dehydrogenase-like protein, at 1,935,266 to 1,936,315 _005637 ABIE53_005638: ABIE53_005638 - mono/diheme cytochrome c family protein, at 1,936,631 to 1,937,986 _005638 ABIE53_005639: ABIE53_005639 - isoquinoline 1-oxidoreductase beta subunit, at 1,938,034 to 1,940,295 _005639 ABIE53_005640: ABIE53_005640 - isoquinoline 1-oxidoreductase alpha subunit, at 1,940,295 to 1,940,906 _005640 ABIE53_005641: ABIE53_005641 - fermentation-respiration switch protein FrsA (DUF1100 family), at 1,941,288 to 1,942,313 _005641
Group Condition ABIE53_005637 ABIE53_005638 ABIE53_005639 ABIE53_005640 ABIE53_005641
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.7 -0.1 -0.2 -0.4
plant outgrowth control Plant outgrowth control -0.6 -0.2 -0.5 -0.3 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.3 -0.2 +0.0 -0.7
stress R2A with Chloride 200 mM -0.4 -0.5 -0.0 -0.6 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -0.2 +0.0 -0.4 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.2 -0.0 -0.5 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.4 +0.2 -0.3 -0.2
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.1 -0.5 -0.2 -0.6 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 +0.2 +0.1 -0.2 -0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.4 -0.1 -0.2 -0.2
stress M9 with Chloride 200 mM -0.5 -0.2 -0.2 +0.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 +0.1 -0.3 -0.3 +0.3
r2a outgrowth control R2A outgrowth control +0.1 -0.2 -0.2 -0.1 -0.7
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.1 -0.1 -0.1 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.1 +0.2 -0.5 -0.4
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM +0.3 -0.0 -0.1 -0.6 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 +0.0 -0.1 +0.3 -0.2
plant outgrowth control Plant outgrowth control -0.3 +0.2 -0.2 +0.2 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.1 -0.2 +0.2 -0.6
carbon source D-Lactate (C) +0.5 -0.4 -0.1 -0.1 -0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -0.3 +0.1 -0.2 -0.2
r2a outgrowth control R2A outgrowth control -0.6 +0.3 -0.0 +0.3 -0.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 -0.3 +0.2 +0.3 -0.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.4 +0.4 -0.0 +0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 +0.1 +0.1 +0.3 -0.1
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.6 -0.1 +0.1 +0.2 +0.4
stress M9 with 3-methyl-2-butenol 2 g/L +0.0 +0.2 +0.1 +0.2 +0.8
stress M9 with 3-methyl-2-butenol 2 g/L +0.2 +0.4 +0.0 +0.4 +0.6
stress M9 with 3-methyl-2-butenol 2 g/L +0.4 +0.3 +0.2 +0.2 +0.6
stress M9 with 3-methyl-2-butenol 2 g/L +0.4 +0.2 +0.2 +0.2 +0.7
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ABIE53_005637
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ABIE53_005638
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ABIE53_005640
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