Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_005625 and ABIE53_005626 are separated by 117 nucleotidesABIE53_005626 and ABIE53_005627 are separated by 627 nucleotidesABIE53_005627 and ABIE53_005628 are separated by 509 nucleotidesABIE53_005628 and ABIE53_005629 are separated by 220 nucleotides ABIE53_005625: ABIE53_005625 - MHS family proline/betaine transporter-like MFS transporter, at 1,920,652 to 1,921,974 _005625 ABIE53_005626: ABIE53_005626 - hypothetical protein, at 1,922,092 to 1,922,322 _005626 ABIE53_005627: ABIE53_005627 - 3-oxoacyl-[acyl-carrier protein] reductase, at 1,922,950 to 1,923,708 _005627 ABIE53_005628: ABIE53_005628 - MHS family proline/betaine transporter-like MFS transporter, at 1,924,218 to 1,925,558 _005628 ABIE53_005629: ABIE53_005629 - 3-hydroxybutyrate dehydrogenase, at 1,925,779 to 1,926,588 _005629
Group Condition ABIE53_005625 ABIE53_005626 ABIE53_005627 ABIE53_005628 ABIE53_005629
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -1.8 -0.4 -1.0 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.4 -1.1 -0.7 -0.6
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 -0.6 -0.2 -1.1 -0.7
carbon source Shikimic Acid 5 mM (C) -0.8 -0.7 -0.5 -0.1 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.3 -0.4 -0.6 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.1 -1.0 -0.5 -0.3
r2a outgrowth control R2A outgrowth control -0.3 -2.1 -0.0 -0.3 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.2 -0.9 -1.1 +0.2
plant outgrowth control Plant outgrowth control -0.8 -1.2 -0.5 -0.1 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.4 -0.8 -0.1 -0.5 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -1.5 -0.3 -0.2 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.3 -0.5 -0.6 -0.2
stress R2A with Tricalcium phosphate 0.5 g/L -0.4 -1.3 -0.2 -0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.4 -1.0 +0.8 -0.2 -1.1
plant outgrowth control Plant outgrowth control -0.9 +0.6 -0.7 -0.4 -0.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 +0.1 -0.5 -0.4 -0.2
carbon source Cinnamic and Ethanols -0.5 -1.7 +0.1 +0.2 -0.1
carbon source Laminarin 10 g/L (C) -0.3 -0.7 -0.2 +0.2 -0.8
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.7 -1.3 +0.2 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.4 -0.5 -0.7 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 +0.5 -0.7 -0.3 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 +0.4 -0.6 -0.4 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.2 -0.8 +0.5 -0.6 -0.3
carbon source D-Glucose-6-Phosphate (C) +0.3 -1.7 +0.6 -0.1 -0.3
carbon source L-Histidine (C) +0.1 -1.4 +0.7 +0.1 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.4 +1.2 -0.3 -0.4
stress M9 with 3-methyl-2-butenol 2 g/L +0.7 +0.4 +0.7 +0.7 +0.1
stress M9 with 3-methyl-2-butenol 2 g/L +0.9 +0.8 +0.3 +0.7 +0.1
stress M9 with 3-methyl-2-butenol 2 g/L +0.8 +0.3 +0.7 +0.6 +0.4
stress M9 with 3-methyl-2-butenol 2 g/L +1.1 +0.6 +0.8 +0.7 +0.3
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ABIE53_005625
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ABIE53_005626
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ABIE53_005628
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ABIE53_005629
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