Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_005616 and ABIE53_005617 are separated by 1 nucleotidesABIE53_005617 and ABIE53_005618 are separated by 117 nucleotidesABIE53_005618 and ABIE53_005619 are separated by 212 nucleotidesABIE53_005619 and ABIE53_005620 are separated by 62 nucleotides ABIE53_005616: ABIE53_005616 - acyl dehydratase, at 1,908,084 to 1,908,953 _005616 ABIE53_005617: ABIE53_005617 - acetyl-CoA acyltransferase, at 1,908,955 to 1,910,205 _005617 ABIE53_005618: ABIE53_005618 - 3-oxoacyl-[acyl-carrier protein] reductase, at 1,910,323 to 1,911,069 _005618 ABIE53_005619: ABIE53_005619 - 2-methylcitrate dehydratase PrpD, at 1,911,282 to 1,912,649 _005619 ABIE53_005620: ABIE53_005620 - acetolactate synthase-1/2/3 large subunit, at 1,912,712 to 1,914,529 _005620
Group Condition ABIE53_005616 ABIE53_005617 ABIE53_005618 ABIE53_005619 ABIE53_005620
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 +0.3 -2.3 +0.8 -0.7
stress R2A with Propan-1-ol 13 g/L -1.2 -0.5 -1.1 +0.4 -0.2
stress R2A with Salicylic 10 uM -0.7 +0.0 -1.6 -0.3 -0.0
carbon source Glucuronamide (C) -0.8 -0.0 -1.3 -0.2 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 -0.9 -0.9 -0.3 +0.2
plant outgrowth control Plant outgrowth control -1.3 -0.4 -0.2 -0.5 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 +0.2 -0.7 -0.6 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.0 -1.1 +0.3 -0.1
carbon source butyrate (C) -1.1 +0.2 -0.7 +0.1 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 +0.3 -0.7 +0.4 +0.0
carbon source Tween 20 (C) -1.4 +0.3 -0.8 +0.6 +0.0
carbon source D-Mannose (C) -1.4 -0.1 -0.0 +0.6 -0.4
pH R2A pH 8.3 -1.1 +0.2 -0.5 +0.4 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +0.7 -0.9 -0.1 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.6 -0.6 -1.1 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -0.3 -0.7 +0.4 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.3 +0.2 -1.2 +0.4 -0.3
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.7 +0.6 -0.8 +0.2 +0.1
nitrogen source Ammonium chloride 0.5 mM (N) +1.2 -0.3 -1.1 -0.3 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 +0.8 +0.9 -0.5 +0.0
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 -0.3 +1.3 -0.4 -0.2
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.4 +0.3 -0.8 +0.5 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.1 +0.2 -0.9 -0.0 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.6 -0.1 -1.1 +0.2 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.5 -0.4 -0.8 +0.2 -0.2
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +1.6 -0.2 -0.8 -0.3 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.7 -0.2 -0.8 -0.0 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +2.1 +0.0 -0.8 -0.1 -0.4
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.5 +0.2 -0.4 +0.8 -0.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.5 -0.0 +0.2 +0.7 -0.4
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ABIE53_005616
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ABIE53_005617
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