Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABIE53_005456	ABIE53_005457	ABIE53_005458	ABIE53_005459	ABIE53_005460
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-1.0	-2.5	-1.1	+0.4	-1.0
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.7	-2.0	-0.9	-0.8	-1.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	-0.4	-1.4	-0.1	-1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-3.3	+0.4	-0.6	-0.2
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.2	-2.0	-0.1	-0.9	-0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.0	-0.9	+0.3	-0.6	-1.0
carbon source	L-Histidine (C)	-0.4	-2.1	-0.2	+0.3	-0.7
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.2	-0.6	-1.6	-0.6	+0.1
biofilm	biofilm; planktonic cells from 96 well plate assay in R2A	+0.0	-2.0	-0.7	+0.2	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-1.5	-1.2	+0.6	-0.2	-0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-1.0	+0.3	-0.3	-1.2
carbon source	butyrate (C)	-0.7	-0.5	-0.9	+0.5	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.6	+1.0	-0.5	-0.2	-1.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.6	-1.2	-0.3	+1.1	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	-1.3	+0.5	+0.3	-0.8
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.6	+2.1	-1.0	-0.9	-0.5
carbon source	Shikimic Acid 5 mM (C)	-1.3	+0.6	+0.7	-0.6	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	+1.0	+0.1	+0.5	-1.0
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-0.9	-0.2	+1.2	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.0	+0.5	+0.6	+0.5	-0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	-0.8	+0.5	+1.1	-0.1
carbon source	Shikimic Acid 5 mM (C)	-1.1	+1.2	+0.4	-0.2	-0.4
carbon source	Acetylated xylan 10 g/L (C)	-0.4	+1.5	-0.6	+0.2	-0.7
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	+0.5	+1.3	-0.1	-0.5	-0.9
carbon source	Laminarin 10 g/L (C)	-0.7	+1.0	+0.5	+0.6	-0.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.7	+1.0	-0.4	-0.9	+0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+2.1	-0.5	-0.3	-0.4
soil extract	Indole-3-pyruvic 5 mM in soil extract	-0.9	+1.8	-0.2	-0.0	+0.2
stress	R2A with Tricalcium phosphate 0.5 g/L	+0.2	+1.6	+0.6	+0.1	-0.9
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.5	+0.5	+1.9	-0.0	+0.7