Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_005430	ABIE53_005431	ABIE53_005432	ABIE53_005433	ABIE53_005434
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.0	-0.2	-0.3	N.D.	-0.7
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.4	-0.4	-1.1	N.D.	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.0	-0.4	+0.9	N.D.	-1.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	+0.6	-1.1	N.D.	+0.1
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.7	+0.3	-0.6	N.D.	-1.2
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.5	+0.4	-0.3	N.D.	-0.9
carbon source	Shikimic Acid 5 mM (C)	-1.2	+0.1	+0.9	N.D.	+0.1
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.5	-0.0	+0.8	N.D.	-1.3
carbon source	Acetylated xylan 10 g/L (C)	+0.2	+0.1	+1.0	N.D.	-1.1
r2a outgrowth control	R2A outgrowth control	+0.0	-0.2	+1.2	N.D.	-0.7
carbon source	D-Arabinose (C)	+0.1	-0.5	+1.6	N.D.	-0.2
carbon source	D-Fructose (C)	+0.5	+0.5	+0.7	N.D.	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.2	+0.5	N.D.	+1.3
carbon source	D-Glucose-6-Phosphate (C)	+0.6	+0.4	+0.9	N.D.	-0.5
carbon source	Tween 20 (C)	+0.5	+0.5	+0.9	N.D.	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	+0.3	-0.2	+2.0	N.D.	-0.5
carbon source	D-Sorbitol (C)	+0.7	+0.1	+1.3	N.D.	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	+0.9	+0.6	N.D.	-0.2
carbon source	L-Histidine (C)	+0.6	+0.3	+1.4	N.D.	-0.5
carbon source	Xylitol (C)	+0.6	+0.2	+1.2	N.D.	-0.2
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.2	-0.2	-0.4	N.D.	+2.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.8	-0.4	+1.0	N.D.	+0.4
carbon source	D-Galactose (C)	+0.9	-0.3	+1.3	N.D.	+0.2
carbon source	D-Gluconic Acid (C)	+0.9	-0.1	+1.4	N.D.	+0.0
carbon source	D-Ribose (C)	+0.1	+0.1	+2.2	N.D.	-0.0
carbon source	D-Ribose (C)	+0.1	+0.0	+2.3	N.D.	-0.2
carbon source	D-Fructose (C)	+0.7	+0.2	+1.2	N.D.	+0.3
carbon source	L-Rhamnose (C)	+0.6	+0.3	+1.5	N.D.	-0.1
carbon source	D-Xylose (C)	+0.4	+0.1	+1.9	N.D.	-0.0
carbon source	D-Mannose (C)	+0.9	+0.5	+1.5	N.D.	+0.1