Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_005373	ABIE53_005374	ABIE53_005375	ABIE53_005376	ABIE53_005377
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	-0.4	-0.0	-0.3	-0.6	-3.7
stress	M9 with 3-methyl-2-butenol 2 g/L	+0.2	+0.4	-0.2	-0.2	-4.5
stress	M9 with Ethanol 2.5 vol%	+0.1	+0.2	+0.2	-0.0	-4.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-0.7	-0.6	-0.4	-1.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	-0.6	-0.9	-0.5	-1.8
stress	RCH2_defined_glucose_5mM with Sucrose 5 mM	-0.4	+0.2	-0.1	-0.5	-2.9
stress	M9 with Isopropyl alcohol 21 g/L	-0.2	-0.2	+0.0	-0.1	-3.1
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.7	-1.1	+0.6	-0.2	-2.3
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	-0.5	+0.5	-0.1	+0.1	-3.5
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-0.4	-0.4	+0.1	-2.9
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.3	+0.1	-0.7	-2.3
soil extract	Indole-3-pyruvic 5 mM in soil extract	-0.0	+0.7	-0.2	-0.8	-2.7
stress	M9 with 3-methyl-3-butenol 4.5 g/L	+0.3	+0.2	+0.2	-0.4	-3.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	+0.5	-0.1	-0.3	-2.9
stress	RCH2_defined_glucose_5mM with Pyridoxal 0.5 mM	+0.2	+0.0	-0.1	+0.1	-3.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	+0.1	-0.3	+0.6	-2.7
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	+0.2	-0.0	+0.3	-3.0
carbon source	Citric Acid (C)	+0.5	+0.2	+0.1	-0.3	-3.0
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.0	-0.3	-0.2	+0.7	-1.5
carbon source	4-Hydroxybenzoic Acid (C)	+0.2	+0.6	+0.1	-0.3	-2.8
phage	Burk1_100	+0.5	+0.2	+0.0	-0.1	-2.8
stress	M9 with Propan-1-ol 13 g/L	+0.4	+0.5	+0.1	+0.0	-3.2
stress	M9 with 3-methyl-3-butenol 4.5 g/L	+0.3	+0.5	+0.1	-0.4	-2.3
m9 no stress control	M9 no stress control	+0.2	+0.6	+0.3	+0.2	-2.6
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.2	+0.5	-0.3	+1.0	-2.2
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	+0.1	+0.2	+0.6	-2.5
stress	R2A with Tricalcium phosphate 0.5 g/L	-0.0	-0.1	-0.8	-0.9	+2.3
stress	M9 with Chloride 200 mM	-0.7	-0.3	+0.3	-0.4	+2.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	-0.3	+0.3	-0.7	+3.5
stress	R2A with Propan-1-ol 13 g/L	+0.2	+0.7	+0.3	-0.3	+2.0