Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_005278	ABIE53_005279	ABIE53_005280	ABIE53_005281	ABIE53_005282
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	N.D.	-0.7	-0.8	-5.0	+1.0
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	N.D.	+0.3	-0.6	-3.8	-0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	N.D.	-0.8	-0.2	-2.5	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.6	-0.4	-2.4	+0.2
carbon source	Uridine (C)	N.D.	-0.2	-0.3	-3.1	+0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	N.D.	-0.3	-0.5	-2.5	+0.4
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	N.D.	-0.5	-0.4	-2.9	+1.0
stress	RCH2_defined_glucose_5mM with Salicylic 5 mM	N.D.	+0.0	-0.4	-3.0	+0.6
stress	RCH2_defined_glucose_5mM with Epiandrosterone 5 mM	N.D.	-0.7	-0.2	-2.6	+0.7
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.4	-0.5	-2.3	+0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	-0.6	-0.0	-2.2	+0.3
soil extract	Indole-3-pyruvic 5 mM in soil extract	N.D.	-0.9	+0.4	-2.8	+0.9
stress	RCH2_defined_glucose_5mM with L-Proline 5 mM	N.D.	-0.1	-0.3	-2.8	+0.6
stress	M9 with Chloride 200 mM	N.D.	+0.5	-0.3	-3.2	+0.5
stress	M9 with 3-methyl-3-butenol 4.5 g/L	N.D.	-0.2	-0.5	-2.4	+0.6
stress	R2A with Ethanol 2.5 vol%	N.D.	+0.4	-0.8	-2.1	+0.1
stress	RCH2_defined_glucose_5mM with 2,3-dihydroxybenzoic 5 mM	N.D.	-0.6	-0.3	-2.2	+0.7
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	N.D.	-0.8	-0.3	-1.7	+0.5
carbon source	Tween 20 (C)	N.D.	-0.7	-0.3	-2.1	+0.9
carbon source	D-Cellobiose (C)	N.D.	-0.6	-0.4	-2.0	+0.7
carbon source	D-Raffinose (C)	N.D.	-0.4	-0.2	-2.1	+0.5
stress	M9 with Chloride 200 mM	N.D.	-0.3	-0.3	-2.2	+0.6
soil extract	Indole-3-pyruvic 5 mM in soil extract	N.D.	-1.1	-0.7	-0.7	+0.8
stress	RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM	N.D.	-0.8	+0.3	-1.7	+0.5
soil extract	Adenine 5 mM in soil extract	N.D.	+0.3	-0.3	-2.3	+0.6
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	N.D.	+0.3	+0.0	-2.8	+0.9
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	N.D.	-0.1	-0.4	-1.9	+0.9
stress	RCH2_defined_glucose_5mM with Chlorogenic 2 mM	N.D.	-1.1	-0.1	-1.2	+0.8
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	N.D.	-0.1	-0.5	-1.8	+1.0
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	N.D.	-1.3	+0.1	+2.2	-0.8