Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_005103	ABIE53_005104	ABIE53_005105	ABIE53_005106	ABIE53_005107
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	-4.4	-4.0	-0.0	+0.1	+0.0
stress	RCH2_defined_glucose_5mM with Cinnamic 5 mM	-4.6	-3.4	-0.1	+0.1	+0.0
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	-3.1	-2.1	-0.1	-0.0	-0.2
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	-2.8	-2.4	+0.1	+0.3	-0.1
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	-2.4	-2.4	+0.3	+0.0	-0.1
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	-2.0	-2.2	-0.0	-0.1	+0.1
soil extract	Indole-3-pyruvic 5 mM in soil extract	-2.2	-1.4	+0.3	-0.4	+0.1
soil extract	Indole-3-pyruvic 5 mM in soil extract	-2.0	-1.4	+0.0	+0.0	-0.2
stress	RCH2_defined_glucose_5mM with Salicylic 5 mM	-1.5	-1.2	-0.0	-0.0	-0.1
carbon source	Acetylated xylan 10 g/L (C)	-0.9	-1.1	-0.5	-0.3	+0.0
stress	R2A with PEG 6000 16 vol%	-1.4	-1.2	+0.2	-0.1	+0.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8	-0.8	-0.2	+0.0	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8	-0.4	-0.6	-0.3	+0.2
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	-1.3	-1.1	+0.3	+0.2	-0.0
stress	R2A with PEG 6000 16 vol%	-0.9	-1.0	+0.1	+0.0	+0.0
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-1.0	+0.1	-0.6	+0.2
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	-1.2	-1.1	+0.3	+0.2	-0.0
stress	R2A with PEG 6000 16 vol%	-0.9	-0.9	+0.1	+0.0	-0.1
stress	R2A with PEG 6000 16 vol%	-1.1	-1.0	+0.3	+0.1	+0.1
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM	-1.1	-0.7	-0.1	+0.2	+0.0
carbon source	Acetylated xylan 10 g/L (C)	-0.5	-0.6	-0.6	+0.4	-0.3
stress	R2A with Chloride 200 mM	-0.7	-0.9	+0.3	-0.2	+0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-0.9	-0.1	+0.5	-0.2
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM	-1.0	-0.7	+0.3	+0.0	+0.0
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.3	-0.8	-0.5	+0.1	+0.3
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-0.7	-0.9	+0.3	+0.5	-0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-0.7	+0.6	+0.5	-0.2
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	-0.7	+0.4	+0.5	-0.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.5	-0.5	+0.3	+1.2	-0.3
carbon source	Glucuronamide (C)	+0.4	+0.3	-0.4	+0.8	-0.1