Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_005097 and ABIE53_005098 overlap by 19 nucleotidesABIE53_005098 and ABIE53_005099 are separated by 141 nucleotidesABIE53_005099 and ABIE53_005100 are separated by 202 nucleotidesABIE53_005100 and ABIE53_005101 are separated by 99 nucleotides ABIE53_005097: ABIE53_005097 - 2-hydroxychromene-2-carboxylate isomerase, at 1,346,374 to 1,347,003 _005097 ABIE53_005098: ABIE53_005098 - hypothetical protein, at 1,346,985 to 1,347,242 _005098 ABIE53_005099: ABIE53_005099 - cell division protein FtsI/penicillin-binding protein 2, at 1,347,384 to 1,348,508 _005099 ABIE53_005100: ABIE53_005100 - hypothetical protein, at 1,348,711 to 1,349,307 _005100 ABIE53_005101: ABIE53_005101 - methyl-accepting chemotaxis protein, at 1,349,407 to 1,350,948 _005101
Group Condition ABIE53_005097 ABIE53_005098 ABIE53_005099 ABIE53_005100 ABIE53_005101
carbon source D-Alanine (C) -0.1 N.D. -4.4 -1.0 -0.0
stress RCH2_defined_glucose_5mM with caffeic 1 mM -0.1 N.D. -4.4 -0.9 +0.0
carbon source D-Alanine (C) -0.1 N.D. -4.1 -1.2 -0.1
stress RCH2_defined_glucose_5mM with caffeic 1 mM -0.3 N.D. -3.9 -1.0 -0.2
r2a outgrowth control R2A outgrowth control +0.0 N.D. -3.6 -1.2 -0.1
nitrogen source 1-aminocyclopropane-1-carboxylate (ACC) (N) +0.1 N.D. -3.4 -1.0 +0.1
phage Burk2_10 +0.0 N.D. -2.9 -0.9 -0.1
nitrogen source 1-aminocyclopropane-1-carboxylate (ACC) (N) +0.1 N.D. -3.0 -0.9 +0.0
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM +0.1 N.D. -3.4 -0.5 -0.0
carbon source Shikimic Acid 5 mM (C) -0.4 N.D. -1.6 -1.4 -0.3
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +0.1 N.D. -3.3 -0.4 +0.2
mixed community Mixed culture; Alteromonas stellipolaris PQQ42 1:1 starting OD to Burkholderia -0.2 N.D. -2.4 -0.8 +0.0
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.0 N.D. -3.0 -0.3 -0.0
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.0 N.D. -3.1 -0.4 +0.2
stress RCH2_defined_glucose_5mM with caffeic 0.5 mM +0.2 N.D. -2.9 -0.6 +0.1
phage Burk1_100 +0.1 N.D. -2.2 -0.9 -0.1
r2a outgrowth control R2A outgrowth control +0.0 N.D. -2.5 -0.7 +0.1
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM +0.2 N.D. -2.7 -0.5 +0.1
phage Burk1_100 +0.3 N.D. -1.9 -1.2 -0.0
stress R2A with PEG 6000 16 vol% +0.0 N.D. +2.1 +1.1 +0.1
stress R2A with PEG 6000 16 vol% +0.1 N.D. +2.2 +1.2 +0.1
stress R2A with PEG 6000 16 vol% +0.1 N.D. +2.3 +1.4 -0.0
m9 no stress control M9 no stress control +0.1 N.D. +3.9 +1.8 -0.0
stress M9 with 3-methyl-2-butenol 2 g/L -0.1 N.D. +3.8 +2.3 -0.0
m9 no stress control M9 no stress control +0.0 N.D. +4.1 +2.0 +0.1
m9 no stress control M9 no stress control +0.3 N.D. +3.9 +1.9 +0.2
m9 no stress control M9 no stress control +0.2 N.D. +4.2 +1.9 +0.2
stress M9 with 3-methyl-2-butenol 2 g/L +0.0 N.D. +4.6 +2.5 +0.2
stress M9 with 3-methyl-2-butenol 2 g/L +0.3 N.D. +4.5 +2.7 +0.0
stress M9 with 3-methyl-2-butenol 2 g/L +0.1 N.D. +4.8 +2.7 +0.0
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