Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_005060	ABIE53_005061	ABIE53_005062	ABIE53_005063	ABIE53_005064
carbon source	D,L-Malic Acid (C)	-0.9	-0.6	-0.4	-0.8	-0.4
carbon source	4-Hydroxybenzoic Acid (C)	-0.4	-0.6	-0.5	-0.7	-0.4
carbon source	Acetylated xylan 10 g/L (C)	+0.3	-2.7	+0.3	-0.5	+0.2
carbon source	L-Serine (C)	-0.6	-0.4	-0.3	-0.7	-0.3
carbon source	D-Galacturonic Acid (C)	-0.3	-0.4	-0.5	-0.6	-0.4
carbon source	D-Galactose (C)	-0.6	-0.3	-0.3	-0.7	-0.2
carbon source	D-Arabinose (C)	-0.4	-0.2	-0.5	-0.8	-0.3
carbon source	Shikimic Acid 5 mM (C)	-0.1	-1.5	-0.2	-0.4	+0.0
carbon source	L-Rhamnose (C)	-0.3	-0.3	-0.1	-1.0	-0.4
carbon source	D-Xylose (C)	-0.8	-0.3	-0.3	-0.2	-0.2
carbon source	4-Hydroxybenzoic Acid (C)	-0.3	-0.5	-0.5	-0.4	-0.2
carbon source	D-Sorbitol (C)	-0.4	-0.2	-0.4	-0.5	-0.4
soil extract	Indole-3-pyruvic 5 mM in soil extract	-1.4	+0.2	-0.1	-0.4	-0.1
carbon source	Glycerol (C)	-0.4	-0.2	-0.3	-0.6	-0.3
carbon source	Shikimic Acid 5 mM (C)	-0.3	-1.0	-0.1	-0.4	+0.1
carbon source	L-Lactate (C)	-0.5	-0.0	-0.4	-0.6	-0.2
carbon source	L-Threonine (C)	-0.6	-0.3	-0.3	-0.5	-0.1
carbon source	Acetylated xylan 10 g/L (C)	+0.2	-2.0	+0.1	+0.3	-0.2
stress	M9 with Propan-1-ol 13 g/L	+0.2	-0.7	-0.4	+0.2	-0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	+0.5	-0.2	+0.3	+0.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	+0.1	-0.1	-0.9	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.6	+0.6	+0.5	-0.1	-0.2
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.5	+0.4	+0.2	+0.4	+0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	+0.5	-0.1	+0.7	+0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	+0.6	+0.5	+0.3	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+0.9	+0.7	-0.2	+0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+0.7	+0.5	+0.3	+0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	+0.5	+0.2	+0.5	+0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	+1.8	+1.2	+0.3	+0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	+1.9	+1.2	+0.3	+0.2