Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_004952	ABIE53_004953	ABIE53_004954	ABIE53_004955	ABIE53_004956
carbon source	Laminarin 10 g/L (C)	-1.1	-0.4	-0.7	-0.0	+0.2
carbon source	Shikimic Acid 5 mM (C)	-1.2	-0.7	+0.0	-0.3	+0.2
carbon source	D-Arabinose (C)	+0.3	-0.5	-0.4	-0.4	-0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8	-0.1	-0.8	+0.2	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.8	-0.4	-0.7	+0.1	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.2	-0.4	-1.0	+0.3	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.2	-0.6	-0.1	+0.3	+0.2
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	-0.4	+0.2	-1.2	+0.1	+0.1
plant outgrowth control	Plant outgrowth control	-0.6	-0.2	-0.7	+0.1	+0.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.0	-0.5	-0.0	+0.1	+0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.2	-0.2	+0.1	-0.0	+0.3
stress	R2A with Ethanol 2.5 vol%	+0.6	-0.1	-1.0	-0.1	-0.2
stress	R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM	+0.6	+0.1	-1.3	-0.0	+0.2
plant outgrowth control	Plant outgrowth control	-0.8	-0.5	+0.5	+0.2	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.7	-0.5	+0.5	+0.1	+0.3
carbon source	D-Glucuronic Acid (C)	-0.7	-0.1	+0.6	+0.2	+0.5
stress	M9 with 3-methyl-2-butenol 2 g/L	+1.4	+0.3	-0.3	+0.1	-0.2
carbon source	Tween 20 (C)	-0.4	+0.1	+1.1	+0.2	+0.4
stress	M9 with 3-methyl-2-butenol 2 g/L	+1.2	+0.6	+0.1	-0.1	-0.3
stress	M9 with 3-methyl-2-butenol 2 g/L	+0.9	+0.5	+0.3	+0.0	-0.2
m9 no stress control	M9 no stress control	+1.2	+0.5	+0.1	-0.0	-0.1
m9 no stress control	M9 no stress control	+0.9	+0.4	+0.5	+0.1	-0.1
carbon source	Tween 20 (C)	+0.1	-0.0	+1.1	+0.3	+0.4
carbon source	Xylitol (C)	+0.4	+0.1	+0.9	+0.2	+0.3
carbon source	m-Inositol (C)	+0.5	+0.1	+0.7	+0.2	+0.4
in planta	Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.1	+0.4	+1.5	+0.1	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+1.1	+0.1	+0.7	+0.1	+0.1
carbon source	D-Glucuronic Acid (C)	+0.1	+0.1	+1.2	+0.3	+0.4
carbon source	D-Glucose-6-Phosphate (C)	-0.1	+0.2	+1.2	+0.3	+0.5
carbon source	D-Gluconic Acid (C)	+0.4	+0.3	+1.1	+0.1	+0.5