Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_004913 and ABIE53_004914 are separated by 101 nucleotidesABIE53_004914 and ABIE53_004915 are separated by 201 nucleotidesABIE53_004915 and ABIE53_004916 are separated by 108 nucleotidesABIE53_004916 and ABIE53_004917 are separated by 307 nucleotides ABIE53_004913: ABIE53_004913 - putative porin, at 1,130,365 to 1,131,507 _004913 ABIE53_004914: ABIE53_004914 - methyl-accepting chemotaxis protein, at 1,131,609 to 1,133,168 _004914 ABIE53_004915: ABIE53_004915 - hypothetical protein, at 1,133,370 to 1,133,777 _004915 ABIE53_004916: ABIE53_004916 - CspA family cold shock protein, at 1,133,886 to 1,134,089 _004916 ABIE53_004917: ABIE53_004917 - threonine/homoserine/homoserine lactone efflux protein, at 1,134,397 to 1,135,032 _004917
Group Condition ABIE53_004913 ABIE53_004914 ABIE53_004915 ABIE53_004916 ABIE53_004917
stress M9 with Chloride 200 mM -3.8 -0.1 +0.0 N.D. +0.1
stress R2A with Chloride 200 mM -3.3 -0.0 -0.2 N.D. -0.1
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -2.7 -0.6 -0.1 N.D. -0.0
stress R2A with Chloride 200 mM -3.2 +0.0 -0.0 N.D. -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.2 -0.2 -0.2 N.D. -0.6
stress R2A with Chloride 200 mM -3.3 -0.0 +0.1 N.D. -0.0
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -2.3 -0.8 -0.2 N.D. +0.1
stress R2A with Chloride 200 mM -2.7 -0.1 -0.1 N.D. -0.2
stress M9 with Chloride 200 mM -3.0 -0.1 -0.0 N.D. +0.2
stress R2A with Tricalcium phosphate 0.5 g/L -1.3 -0.1 -0.9 N.D. -0.7
phage Burk1_100 -2.6 -0.0 -0.0 N.D. -0.2
stress R2A with Tricalcium phosphate 0.5 g/L -1.3 -0.1 -0.6 N.D. -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.4 -0.0 +0.0 N.D. -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.3 +0.2 -0.1 N.D. -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.2 +0.1 -0.3 N.D. -0.4
phage Burk1_100 -2.5 -0.1 -0.1 N.D. +0.1
r2a outgrowth control R2A outgrowth control -2.2 -0.1 -0.2 N.D. -0.2
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -2.8 +0.0 +0.2 N.D. -0.0
stress RCH2_defined_glucose_5mM with caffeic 1 mM -2.4 +0.0 +0.0 N.D. -0.2
stress RCH2_defined_glucose_5mM with Lumazine 5 mM -2.6 -0.0 -0.0 N.D. +0.2
r2a outgrowth control R2A outgrowth control -2.0 -0.3 +0.1 N.D. -0.2
stress M9 with Chloride 200 mM -3.0 +0.0 +0.4 N.D. +0.2
stress M9 with Chloride 200 mM -3.0 +0.2 +0.2 N.D. +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.9 -0.2 +0.0 N.D. -0.2
stress RCH2_defined_glucose_5mM with caffeic 1 mM -2.0 -0.1 -0.2 N.D. +0.2
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -2.1 +0.1 +0.1 N.D. +0.1
stress Growth in presence of pinene -1.8 -0.1 +0.3 N.D. -0.1
stress M9 with Ethanol 2.5 vol% -2.0 +0.0 +0.2 N.D. +0.2
carbon source Shikimic Acid 5 mM (C) +0.6 -0.3 -0.8 N.D. -0.9
plant outgrowth control Plant outgrowth control +1.2 -0.3 -0.7 N.D. -1.0
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ABIE53_004913
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ABIE53_004914
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