Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_004909	ABIE53_004910	ABIE53_004911	ABIE53_004912	ABIE53_004913
stress	M9 with Chloride 200 mM	+0.1	-0.7	-0.7	N.D.	-3.0
stress	R2A with Chloride 200 mM	-0.1	-0.9	+0.1	N.D.	-3.3
stress	R2A with Chloride 200 mM	+0.1	-0.7	+0.1	N.D.	-3.3
stress	M9 with Chloride 200 mM	-0.1	+0.3	+0.0	N.D.	-3.8
plant outgrowth control	Plant outgrowth control	-0.5	-4.0	-0.2	N.D.	+1.2
stress	R2A with Chloride 200 mM	+0.2	-0.5	-0.0	N.D.	-3.2
stress	R2A with Tricalcium phosphate 0.5 g/L	-0.0	-1.7	-0.5	N.D.	-1.3
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-0.2	-0.1	-0.3	N.D.	-2.8
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	-1.9	-0.1	N.D.	-1.0
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.1	-1.5	-0.3	N.D.	-1.5
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	-0.3	-0.9	+0.0	N.D.	-2.1
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-0.0	-1.2	+0.4	N.D.	-2.4
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	-0.7	-0.7	N.D.	-1.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.4	-1.8	-0.2	N.D.	-0.7
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	+0.1	-0.5	+0.2	N.D.	-2.7
stress	M9 with Chloride 200 mM	+0.1	+0.1	+0.0	N.D.	-3.0
carbon source	Acetylated xylan 10 g/L (C)	+0.2	-1.3	-1.0	N.D.	-0.7
stress	R2A with Chloride 200 mM	-0.2	-0.2	+0.3	N.D.	-2.7
stress	RCH2_defined_glucose_5mM with Lumazine 5 mM	-0.1	-0.2	+0.3	N.D.	-2.6
stress	M9 with Chloride 200 mM	-0.2	+0.3	+0.3	N.D.	-3.0
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-0.2	-0.5	+0.4	N.D.	-2.3
phage	Burk1_100	+0.1	+0.4	-0.5	N.D.	-2.6
stress	RCH2_defined_glucose_5mM with Ferulic Acid 5 mM	+0.1	-1.5	+0.6	N.D.	-1.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	-0.7	+0.0	N.D.	-2.3
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	+0.4	-1.0	N.D.	-2.2
r2a outgrowth control	R2A outgrowth control	-0.1	+0.7	-0.5	N.D.	-2.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	+0.9	-0.2	N.D.	-2.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.8	-0.8	+0.7	N.D.	-2.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.6	+0.2	+0.4	N.D.	-1.9
carbon source	Inosine (C)	+0.1	-1.8	+0.2	N.D.	+0.9