Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_004879 and ABIE53_004880 are separated by 30 nucleotidesABIE53_004880 and ABIE53_004881 are separated by 4 nucleotidesABIE53_004881 and ABIE53_004882 are separated by 2 nucleotidesABIE53_004882 and ABIE53_004883 are separated by 219 nucleotides ABIE53_004879: ABIE53_004879 - succinate dehydrogenase / fumarate reductase iron-sulfur subunit, at 1,099,012 to 1,099,716 _004879 ABIE53_004880: ABIE53_004880 - succinate dehydrogenase / fumarate reductase flavoprotein subunit, at 1,099,747 to 1,101,522 _004880 ABIE53_004881: ABIE53_004881 - succinate dehydrogenase / fumarate reductase membrane anchor subunit, at 1,101,527 to 1,101,895 _004881 ABIE53_004882: ABIE53_004882 - succinate dehydrogenase / fumarate reductase cytochrome b subunit, at 1,101,898 to 1,102,314 _004882 ABIE53_004883: ABIE53_004883 - DNA-binding transcriptional LysR family regulator, at 1,102,534 to 1,103,430 _004883
Group Condition ABIE53_004879 ABIE53_004880 ABIE53_004881 ABIE53_004882 ABIE53_004883
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. -2.0
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days N.D. N.D. N.D. N.D. -1.4
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days N.D. N.D. N.D. N.D. -1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. -1.3
stress RCH2_defined_glucose_5mM with 4-Hydroxybenzoic Acid 5 mM N.D. N.D. N.D. N.D. -1.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days N.D. N.D. N.D. N.D. -1.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. -1.1
stress RCH2_defined_glucose_5mM with Adenine 4 mM N.D. N.D. N.D. N.D. -1.1
stress RCH2_defined_glucose_5mM with Adenine 5 mM N.D. N.D. N.D. N.D. -1.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. -1.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days N.D. N.D. N.D. N.D. -0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. -0.8
carbon source succinate (C) N.D. N.D. N.D. N.D. -0.8
soil extract Shikimic Acid 5 mM in soil extract N.D. N.D. N.D. N.D. -0.8
motility_chemotaxis Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut N.D. N.D. N.D. N.D. -0.8
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. -0.7
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. N.D. N.D. -0.7
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. -0.7
phage Burk2_1 N.D. N.D. N.D. N.D. -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. -0.7
carbon source succinate (C) N.D. N.D. N.D. N.D. -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days N.D. N.D. N.D. N.D. +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days N.D. N.D. N.D. N.D. +0.7
carbon source Acetylated xylan 10 g/L (C) N.D. N.D. N.D. N.D. +0.8
carbon source D-Glucuronic Acid (C) N.D. N.D. N.D. N.D. +0.8
carbon source D-Glucose-6-Phosphate (C) N.D. N.D. N.D. N.D. +0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. +0.8
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days N.D. N.D. N.D. N.D. +0.9
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