Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_004837 and ABIE53_004838 are separated by 1 nucleotidesABIE53_004838 and ABIE53_004839 are separated by 46 nucleotidesABIE53_004839 and ABIE53_004840 are separated by 131 nucleotidesABIE53_004840 and ABIE53_004841 are separated by 336 nucleotides ABIE53_004837: ABIE53_004837 - molybdate transport system ATP-binding protein, at 1,054,599 to 1,055,300 _004837 ABIE53_004838: ABIE53_004838 - molybdate transport system permease protein, at 1,055,302 to 1,055,976 _004838 ABIE53_004839: ABIE53_004839 - molybdate transport system substrate-binding protein, at 1,056,023 to 1,056,796 _004839 ABIE53_004840: ABIE53_004840 - membrane-associated phospholipid phosphatase, at 1,056,928 to 1,057,629 _004840 ABIE53_004841: ABIE53_004841 - poly(hydroxyalkanoate) depolymerase family esterase, at 1,057,966 to 1,059,156 _004841
Group Condition ABIE53_004837 ABIE53_004838 ABIE53_004839 ABIE53_004840 ABIE53_004841
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.4 -4.7 -3.1 +0.1 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.9 -2.7 -2.8 +0.1 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -3.0 -2.4 -2.7 +0.0 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.5 -2.9 -2.6 -0.0 +0.4
stress RCH2_defined_glucose_5mM with Adenine 5 mM -2.2 -1.8 -2.2 -0.0 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -2.8 -1.5 -2.0 -0.1 +0.2
stress RCH2_defined_glucose_5mM with Adenine 5 mM -1.9 -1.2 -2.1 -0.3 -0.3
stress RCH2_defined_glucose_5mM with Adenine 2 mM -2.1 -2.3 -1.6 +0.3 +0.1
stress RCH2_defined_glucose_5mM with Adenine 4 mM -1.7 -1.5 -2.2 -0.2 -0.1
stress RCH2_defined_glucose_5mM with Adenine 2 mM -1.7 -2.0 -2.0 +0.2 -0.0
stress RCH2_defined_glucose_5mM with Adenine 4 mM -1.1 -1.4 -2.4 -0.1 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 -2.1 -1.8 +0.1 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.7 -1.3 -1.7 +0.1 +0.0
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -0.7 -1.7 -0.4 -0.5 -0.4
soil extract Indole-3-pyruvic 5 mM in soil extract -1.3 -0.8 -0.6 -0.6 -0.2
stress M9 with 3-methyl-2-butenol 2 g/L -0.4 -0.8 -0.7 -1.4 -0.1
soil extract Indole-3-pyruvic 5 mM in soil extract -1.5 -1.5 -0.4 +0.1 -0.1
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -1.4 -0.8 -0.8 -0.1 -0.2
stress M9 with 3-methyl-2-butenol 2 g/L -0.8 -0.7 -0.7 -1.0 +0.0
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -1.0 -0.7 -1.0 -0.1 -0.4
carbon source Inosine (C) -1.4 -0.9 -0.7 -0.0 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.9 -0.9 -0.6 +0.1 -0.5
carbon source Inosine (C) -1.4 -0.9 -0.6 +0.3 +0.0
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -1.3 -0.7 -0.6 +0.1 -0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.5 -1.1 -0.2 +0.4 -0.1
carbon source Acetylated xylan 10 g/L (C) -1.3 -1.1 -0.4 +0.6 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 -1.7 -0.4 +0.2 +0.2
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.6 -1.2 -0.8 +0.7 +0.2
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +1.1 +0.9 +1.0 -0.4 -0.1
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +1.2 +1.4 +1.2 -0.1 -0.1
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