Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_004820 and ABIE53_004821 are separated by 128 nucleotidesABIE53_004821 and ABIE53_004822 are separated by 20 nucleotidesABIE53_004822 and ABIE53_004823 overlap by 4 nucleotidesABIE53_004823 and ABIE53_004824 overlap by 4 nucleotides ABIE53_004820: ABIE53_004820 - K+-sensing histidine kinase KdpD, at 1,027,408 to 1,028,220 _004820 ABIE53_004821: ABIE53_004821 - CBS domain containing-hemolysin-like protein, at 1,028,349 to 1,029,689 _004821 ABIE53_004822: ABIE53_004822 - (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase, at 1,029,710 to 1,032,565 _004822 ABIE53_004823: ABIE53_004823 - 4-alpha-glucanotransferase, at 1,032,562 to 1,034,772 _004823 ABIE53_004824: ABIE53_004824 - maltooligosyltrehalose trehalohydrolase, at 1,034,769 to 1,036,697 _004824
Group Condition ABIE53_004820 ABIE53_004821 ABIE53_004822 ABIE53_004823 ABIE53_004824
stress RCH2_defined_glucose_5mM with Serotonin 5 mM +2.8 -1.1 -0.3 -0.7 -0.5
stress RCH2_defined_glucose_5mM with Serotonin 5 mM +2.8 -1.1 -0.5 -0.3 -0.3
stress RCH2_defined_glucose_5mM with caffeic 1 mM +2.9 -1.3 -0.4 -0.1 -0.1
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +2.9 -0.3 -0.3 -0.9 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +3.2 +0.2 +0.1 -1.8 -0.4
stress RCH2_defined_glucose_5mM with Lumazine 5 mM +3.2 -0.3 -0.3 -0.5 -0.4
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM +4.5 -0.5 -0.4 -0.6 -0.8
stress RCH2_defined_glucose_5mM with caffeic 1 mM +3.0 -0.7 +0.1 -0.5 +0.4
stress RCH2_defined_glucose_5mM with 2-Deoxy-D-glucose 5 mM +3.6 -0.4 -0.1 -0.4 -0.1
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM +4.8 -0.5 -0.4 -0.9 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +4.2 -0.0 -0.4 -0.5 -0.3
carbon source Tween 20 (C) +3.6 +0.3 -0.1 -0.7 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +4.1 -0.0 +0.2 -0.7 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +4.0 -0.5 +0.2 -0.3 +0.6
stress M9 with 3-methyl-2-butenol 2 g/L +1.9 -0.5 +1.0 +0.8 +0.9
carbon source Tween 20 (C) +4.0 -0.0 -0.1 -0.2 +0.4
stress M9 with 3-methyl-2-butenol 2 g/L +1.9 -0.5 +1.1 +0.8 +0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +4.3 +0.3 -0.1 -0.2 +0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +5.1 -0.2 +0.3 -0.5 -0.2
stress M9 with 3-methyl-2-butenol 2 g/L +2.3 -0.6 +1.1 +0.8 +1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +4.8 -0.1 -0.0 +0.2 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +5.7 -0.1 +0.4 -0.8 -0.1
carbon source Glucuronamide (C) +4.0 +0.3 +0.4 +0.1 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +5.3 +0.3 +0.6 -1.0 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +4.6 +0.4 -0.0 +0.4 -0.1
carbon source Glucuronamide (C) +4.4 +0.2 +0.5 -0.1 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +5.1 +0.0 -0.1 +0.3 +0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +6.2 -0.3 +0.3 -0.5 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +4.4 +0.3 +0.1 +0.5 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +8.6 +0.5 -0.1 -0.3 +0.1
remove
ABIE53_004820
plot		 remove
ABIE53_004821
plot		 remove
ABIE53_004822		 remove
ABIE53_004823
plot		 remove
ABIE53_004824
plot