Fitness for 5 genes in Paraburkholderia graminis OAS925

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 488 experiments or choose conditions or try the comparative fitness browser

500 ntABIE53_004806 and ABIE53_004807 overlap by 4 nucleotidesABIE53_004807 and ABIE53_004808 overlap by 25 nucleotidesABIE53_004808 and ABIE53_004809 overlap by 4 nucleotidesABIE53_004809 and ABIE53_004810 are separated by 11 nucleotides ABIE53_004806: ABIE53_004806 - pilus assembly protein FimV, at 1,011,722 to 1,014,253 _004806 ABIE53_004807: ABIE53_004807 - tRNA pseudouridine38-40 synthase, at 1,014,250 to 1,015,062 _004807 ABIE53_004808: ABIE53_004808 - phosphoribosylanthranilate isomerase, at 1,015,038 to 1,015,781 _004808 ABIE53_004809: ABIE53_004809 - tryptophan synthase beta chain, at 1,015,778 to 1,017,031 _004809 ABIE53_004810: ABIE53_004810 - site-specific DNA-methyltransferase (adenine-specific), at 1,017,043 to 1,017,954 _004810
Group Condition ABIE53_004806 ABIE53_004807 ABIE53_004808 ABIE53_004809 ABIE53_004810
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -4.2 -1.1 N.D. N.D. -1.3
stress R2A with Propan-1-ol 13 g/L -1.2 -2.7 N.D. N.D. -2.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.2 -2.2 N.D. N.D. -2.6
stress R2A with Propan-1-ol 13 g/L -0.8 -1.9 N.D. N.D. -2.8
stress R2A with Propan-1-ol 13 g/L -1.4 -1.9 N.D. N.D. -2.2
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -3.2 -0.6 N.D. N.D. -1.6
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -2.0 -1.5 N.D. N.D. -1.6
stress R2A with Propan-1-ol 13 g/L -0.7 -1.5 N.D. N.D. -2.0
stress R2A with Isopropyl alcohol 21 g/L -0.4 -1.3 N.D. N.D. -2.6
stress Growth in presence of pinene -1.5 -1.3 N.D. N.D. -1.3
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM -1.5 -1.2 N.D. N.D. -1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -1.2 N.D. N.D. -2.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.7 -1.6 N.D. N.D. -2.0
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.7 -1.4 N.D. N.D. -1.9
stress RCH2_defined_glucose_5mM with caffeic 1 mM +0.8 -1.6 N.D. N.D. -1.6
carbon source shik 5mM +0.9 -0.1 N.D. N.D. -3.0
carbon source shik 5mM +0.9 +0.2 N.D. N.D. -3.0
carbon source shik 20mM +1.0 -0.4 N.D. N.D. -2.5
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.3 +1.3 N.D. N.D. -1.7
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.3 +1.3 N.D. N.D. -2.6
carbon source Shikimic Acid 5 mM (C) +1.7 +0.6 N.D. N.D. -3.2
carbon source Shikimic Acid 5 mM (C) +1.6 +0.6 N.D. N.D. -2.6
stress RCH2_defined_glucose_5mM with Adenine 5 mM +1.5 +1.1 N.D. N.D. -1.5
carbon source Tween 20 (C) +1.8 +0.8 N.D. N.D. -1.2
carbon source Tween 20 (C) +2.0 +1.0 N.D. N.D. -1.5
plant outgrowth control Plant outgrowth control +1.4 +1.4 N.D. N.D. -1.1
plant outgrowth control Plant outgrowth control +1.9 +2.0 N.D. N.D. -0.6
plant outgrowth control Plant outgrowth control +1.7 +2.0 N.D. N.D. -0.1
carbon source Azelaic 20 mM (C) +2.0 +0.8 N.D. N.D. +2.0
carbon source Azelaic 20 mM (C) +2.0 +0.6 N.D. N.D. +2.2
remove
ABIE53_004806
plot		 remove
ABIE53_004807
plot		 remove
ABIE53_004808		 remove
ABIE53_004809
plot		 remove
ABIE53_004810
plot