Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_004779 and ABIE53_004780 overlap by 4 nucleotidesABIE53_004780 and ABIE53_004781 are separated by 20 nucleotidesABIE53_004781 and ABIE53_004782 are separated by 34 nucleotidesABIE53_004782 and ABIE53_004783 are separated by 27 nucleotides ABIE53_004779: ABIE53_004779 - putative lipoprotein, at 983,515 to 984,150 _004779 ABIE53_004780: ABIE53_004780 - erythritol transport system ATP-binding protein, at 984,147 to 985,685 _004780 ABIE53_004781: ABIE53_004781 - erythritol transport system permease protein, at 985,706 to 986,788 _004781 ABIE53_004782: ABIE53_004782 - glycerol kinase, at 986,823 to 988,292 _004782 ABIE53_004783: ABIE53_004783 - meso-butanediol dehydrogenase/(S,S)-butanediol dehydrogenase/diacetyl reductase, at 988,320 to 989,111 _004783
Group Condition ABIE53_004779 ABIE53_004780 ABIE53_004781 ABIE53_004782 ABIE53_004783
plant outgrowth control Plant outgrowth control -1.2 -0.4 -0.5 -0.8 -0.4
plant outgrowth control Plant outgrowth control +0.2 -0.9 -0.6 -1.0 -0.3
plant outgrowth control Plant outgrowth control +0.0 -0.7 -0.5 -0.9 -0.2
plant outgrowth control Plant outgrowth control -0.3 -0.7 -0.4 -0.9 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.8 -0.6 -0.2 +0.1 -0.5
carbon source Shikimic Acid 5 mM (C) -0.4 -0.7 -0.2 -0.4 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 -0.6 +0.2 -0.2 +0.2
plant outgrowth control Plant outgrowth control +0.1 -0.4 -0.7 -0.3 -0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +0.1 -0.1 -1.0 -0.2
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.3 -0.2 -1.0 +0.2 -0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.4 -0.3 -0.5 +0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -0.2 -0.1 -0.7 -0.5
nitrogen source histamine 2mM N source -1.3 +0.3 -0.5 +0.3 +0.4
stress R2A with (5z)-4-bromo-5-(bromomethylene)-2(5h)-furanone 10 uM -0.7 -0.3 +0.3 +0.3 -0.3
carbon source Acetylated xylan 10 g/L (C) +0.6 -0.4 -0.4 -0.6 +0.2
soil extract Indole-3-pyruvic 5 mM in soil extract -0.6 +0.5 -0.1 -0.7 +0.3
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 +0.2 +0.7 -0.6 -0.2
carbon source m-Inositol (C) -0.7 -0.4 +0.4 +0.6 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +0.2 +0.4 -0.8 +0.3
carbon source D-Glucose (C) -0.4 -0.3 +0.8 +0.3 +0.2
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.8 +0.0 +0.2 +0.3 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +1.0 +0.1 +0.5 -0.6 -0.2
carbon source D-Galactose (C) -0.6 -0.0 +0.5 +0.6 +0.4
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +0.0 +0.4 +0.4 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.3 -0.2 -0.4 +0.3 +0.0
carbon source D-Fructose (C) +0.0 -0.3 +0.6 +0.6 +0.4
carbon source D-Mannose (C) +0.5 -0.5 +0.7 +0.3 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.3 +1.0 +0.5 -0.1
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.4 +0.4 +0.4 +0.6 +0.2
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 -0.2 +0.5 +0.3 +0.8
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