Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_004760	ABIE53_004761	ABIE53_004762	ABIE53_004763	ABIE53_004764
stress	M9 with Ethanol 2.5 vol%	-3.2	-0.3	N.D.	N.D.	-1.3
stress	M9 with Ethanol 2.5 vol%	-2.7	-0.3	N.D.	N.D.	-1.2
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.2	-1.1	N.D.	N.D.	-1.7
stress	M9 with Ethanol 2.5 vol%	-2.4	-0.6	N.D.	N.D.	-0.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-3.3	-0.9	N.D.	N.D.	+0.4
stress	R2A with Propan-1-ol 13 g/L	-2.7	-0.9	N.D.	N.D.	-0.1
stress	R2A with Ethanol 2.5 vol%	-1.9	-0.5	N.D.	N.D.	-1.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.7	-0.4	N.D.	N.D.	-1.5
stress	R2A with Propan-1-ol 13 g/L	-2.7	-0.7	N.D.	N.D.	-0.0
plant outgrowth control	Plant outgrowth control	-3.3	-0.1	N.D.	N.D.	+0.1
plant outgrowth control	Plant outgrowth control	-2.8	-0.3	N.D.	N.D.	-0.1
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.3	-0.9	N.D.	N.D.	-1.0
stress	R2A with Isopropyl alcohol 21 g/L	-2.4	-0.5	N.D.	N.D.	-0.3
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-2.0	-0.2	N.D.	N.D.	-0.9
stress	M9 with 3-methyl-2-butenol 2 g/L	-0.3	-1.2	N.D.	N.D.	-1.7
stress	M9 with Ethanol 2.5 vol%	-1.3	-0.7	N.D.	N.D.	-0.9
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-2.4	-0.2	N.D.	N.D.	-0.4
stress	M9 with 3-methyl-2-butenol 2 g/L	-1.1	-0.2	N.D.	N.D.	-1.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.7	-0.5	N.D.	N.D.	-0.7
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-2.1	-0.2	N.D.	N.D.	-0.6
stress	M9 with Chloride 200 mM	-1.6	-0.2	N.D.	N.D.	-1.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-2.6	-0.4	N.D.	N.D.	+0.4
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	-1.9	-0.8	N.D.	N.D.	+0.1
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-2.3	+0.3	N.D.	N.D.	-0.5
stress	R2A with Ethanol 2.5 vol%	-2.3	+0.4	N.D.	N.D.	-0.6
stress	RCH2_defined_glucose_5mM with Pyridoxal 1 mM	-2.1	-0.5	N.D.	N.D.	+0.2
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM	-2.1	-0.3	N.D.	N.D.	+0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.4	-0.6	N.D.	N.D.	+1.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.4	-0.5	N.D.	N.D.	+1.1
carbon source	Acetylated xylan 10 g/L (C)	-2.1	+0.8	N.D.	N.D.	+0.8