Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_004759 and ABIE53_004760 are separated by 25 nucleotidesABIE53_004760 and ABIE53_004761 are separated by 100 nucleotidesABIE53_004761 and ABIE53_004762 are separated by 25 nucleotidesABIE53_004762 and ABIE53_004763 are separated by 189 nucleotides ABIE53_004759: ABIE53_004759 - 2-methylcitrate dehydratase, at 963,402 to 964,853 _004759 ABIE53_004760: ABIE53_004760 - hypothetical protein, at 964,879 to 965,382 _004760 ABIE53_004761: ABIE53_004761 - 2-methylcitrate synthase, at 965,483 to 966,652 _004761 ABIE53_004762: ABIE53_004762 - citrate lyase subunit beta/citryl-CoA lyase, at 966,678 to 967,676 _004762 ABIE53_004763: ABIE53_004763 - malate dehydrogenase, at 967,866 to 968,849 _004763
Group Condition ABIE53_004759 ABIE53_004760 ABIE53_004761 ABIE53_004762 ABIE53_004763
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -3.3 -0.9 N.D. N.D.
stress M9 with Ethanol 2.5 vol% -0.6 -2.7 -0.3 N.D. N.D.
stress M9 with Ethanol 2.5 vol% -0.5 -2.4 -0.6 N.D. N.D.
stress M9 with Ethanol 2.5 vol% -0.1 -3.2 -0.3 N.D. N.D.
stress R2A with Propan-1-ol 13 g/L +0.1 -2.7 -0.9 N.D. N.D.
plant outgrowth control Plant outgrowth control +0.2 -3.3 -0.1 N.D. N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.5 -1.9 -0.8 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -2.6 -0.4 N.D. N.D.
stress R2A with Propan-1-ol 13 g/L +0.2 -2.7 -0.7 N.D. N.D.
stress RCH2_defined_glucose_5mM with Pyridoxal 1 mM -0.3 -2.1 -0.5 N.D. N.D.
stress R2A with Isopropyl alcohol 21 g/L -0.1 -2.4 -0.5 N.D. N.D.
plant outgrowth control Plant outgrowth control +0.3 -2.8 -0.3 N.D. N.D.
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -0.6 -2.0 -0.2 N.D. N.D.
stress R2A with Ethanol 2.5 vol% -0.2 -1.9 -0.5 N.D. N.D.
stress M9 with Ethanol 2.5 vol% -0.5 -1.3 -0.7 N.D. N.D.
stress R2A with Isopropyl alcohol 21 g/L -0.2 -2.4 +0.1 N.D. N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 -2.4 -0.2 N.D. N.D.
stress RCH2_defined_glucose_5mM with caffeic 1 mM -0.4 -2.3 +0.3 N.D. N.D.
stress R2A with Propan-1-ol 13 g/L -0.3 -2.1 -0.0 N.D. N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.1 -2.1 -0.2 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -0.7 -1.5 N.D. N.D.
stress RCH2_defined_glucose_5mM with Indole-3-pyruvic 1 mM +0.1 -2.1 -0.3 N.D. N.D.
plant outgrowth control Plant outgrowth control +0.1 -2.2 -0.1 N.D. N.D.
stress R2A with 3-methyl-3-butenol 4.5 g/L -0.2 -2.1 +0.1 N.D. N.D.
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 -1.7 -0.5 N.D. N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -1.3 -0.9 N.D. N.D.
stress R2A with Ethanol 2.5 vol% +0.1 -2.3 +0.4 N.D. N.D.
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.6 -1.2 -0.6 N.D. N.D.
carbon source Acetylated xylan 10 g/L (C) +0.8 -2.1 +0.8 N.D. N.D.
carbon source Acetylated xylan 10 g/L (C) +1.3 -0.4 +0.7 N.D. N.D.
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