Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_004741 and ABIE53_004742 are separated by 152 nucleotidesABIE53_004742 and ABIE53_004743 are separated by 160 nucleotidesABIE53_004743 and ABIE53_004744 are separated by 166 nucleotidesABIE53_004744 and ABIE53_004745 are separated by 197 nucleotides ABIE53_004741: ABIE53_004741 - hypothetical protein, at 938,091 to 938,396 _004741 ABIE53_004742: ABIE53_004742 - 3-hydroxybutyryl-CoA dehydrogenase, at 938,549 to 939,472 _004742 ABIE53_004743: ABIE53_004743 - flavin reductase (DIM6/NTAB) family NADH-FMN oxidoreductase RutF, at 939,633 to 940,244 _004743 ABIE53_004744: ABIE53_004744 - methyl-accepting chemotaxis protein, at 940,411 to 942,384 _004744 ABIE53_004745: ABIE53_004745 - Cu+-exporting ATPase, at 942,582 to 944,936 _004745
Group Condition ABIE53_004741 ABIE53_004742 ABIE53_004743 ABIE53_004744 ABIE53_004745
carbon source D-Lactate (C) -0.2 +0.2 -0.0 -0.1 -3.2
stress RCH2_defined_glucose_5mM with Adenine 5 mM -0.2 +0.0 -0.0 -0.1 -2.6
carbon source D-Lactate (C) +0.1 -0.2 -0.3 +0.1 -2.3
motility_chemotaxis Motility_chemotaxis, R2A; outer cut -0.0 +0.2 -0.4 -2.0 +0.0
motility_chemotaxis Motility_chemotaxis, R2A; outer cut +0.0 +0.0 +0.0 -1.9 -0.1
stress RCH2_defined_glucose_5mM with Adenine 5 mM +0.3 +0.2 -0.0 -0.1 -2.2
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.0 -0.2 -0.2 +0.0 -1.4
soil extract Indole-3-pyruvic 5 mM in soil extract -0.1 -0.3 -0.2 +0.0 -1.2
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.2 +0.3 +0.0 -0.0 -1.7
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 +0.2 +0.0 +0.1 -1.1
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 +0.1 -0.2 +0.3 -0.7
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.2 +0.4 -0.1 +0.6 -1.4
stress RCH2_defined_glucose_5mM with Adenine 4 mM +0.2 +0.1 +0.2 +0.2 -1.3
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.3 +0.4 +0.2 -0.1 -1.0
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.0 -0.1 +0.5 -0.7 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.1 +0.3 +0.8 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.0 -0.1 +0.1 +1.2 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.1 +0.4 +0.6 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +0.0 +0.1 +1.3 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.1 +0.0 -0.1 +1.8 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.3 +0.4 +1.2 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 +0.1 +0.1 +1.9 -0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.1 +0.1 +1.8 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.1 +0.2 +0.2 +1.9 -0.1
carbon source L-Histidine (C) +0.2 +0.1 +0.1 +2.0 -0.1
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.5 +0.4 +0.2 +1.6 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 +0.1 +0.1 +1.5 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.4 -0.0 -0.1 +2.5 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.1 +0.1 +3.1 -0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.1 +0.1 +0.2 +3.5 -0.2
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