Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_004702	ABIE53_004703	ABIE53_004704	ABIE53_004705	ABIE53_004706
carbon source	D,L-Malic Acid (C)	-2.1	-0.3	-0.2	-0.2	-0.3
plant outgrowth control	Plant outgrowth control	-0.8	+0.0	+0.0	-0.3	-1.8
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-2.7	+0.4	+0.2	-0.2	-0.4
in planta	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.8	-0.4	+0.2	+0.2	-0.9
soil extract	Sucrose 5 mM in soil extract	-1.7	+0.2	-0.2	-0.1	-0.7
carbon source	L-Histidine (C)	-1.3	-0.4	+0.1	-0.1	-0.7
carbon source	Tween 20 (C)	-1.2	-0.7	-0.2	-0.2	-0.1
carbon source	Inosine (C)	-1.1	-0.3	-0.1	-0.1	-0.7
carbon source	D-Serine (C)	-2.5	+0.1	-0.1	+0.0	+0.3
carbon source	Tween 20 (C)	-1.3	-0.1	+0.0	-0.1	-0.5
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.8	+0.2	+0.2	-0.1	-0.6
stress	RCH2_defined_glucose_5mM with caffeic 1 mM	-1.3	-0.0	-0.1	+0.1	-0.6
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-1.2	-0.3	+0.1	+0.0	-0.4
stress	R2A with Propan-1-ol 13 g/L	-1.5	-0.2	+0.1	+0.2	-0.3
carbon source	D-Fructose (C)	-0.7	-0.5	+0.1	-0.2	-0.3
stress	M9 with 3-methyl-2-butenol 2 g/L	-2.1	+0.0	-0.0	+0.3	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.7	-0.1	+0.3	-0.5	-0.6
plant outgrowth control	Plant outgrowth control	-0.4	+0.3	-0.1	-0.3	-1.0
carbon source	Azelaic 20 mM (C)	-2.1	+0.3	+0.3	-0.1	+0.2
carbon source	Glycerol (C)	-1.4	+0.2	+0.2	-0.0	-0.2
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	+0.2	+0.1	+0.1	-0.8
carbon source	Azelaic 20 mM (C)	-1.3	+0.2	+0.3	-0.0	-0.4
stress	R2A with Ethanol 2.5 vol%	-1.5	+0.0	+0.1	+0.3	+0.1
stress	M9 with 3-methyl-2-butenol 2 g/L	-1.3	+0.1	-0.1	+0.3	+0.6
carbon source	Shikimic Acid 5 mM (C)	+0.8	-0.0	+0.1	-0.1	-1.0
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.6	-1.2	-0.2	-0.0	+0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.6	+0.2	+0.3	-0.2	-1.0
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.5	+0.3	+0.3	-0.4	-0.6
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	+1.2	-0.5	-0.1	+0.0	-0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.9	+0.7	+0.2	-0.0	-0.3