Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_004619	ABIE53_004620	ABIE53_004621	ABIE53_004622	ABIE53_004623
stress	M9 with PEG 6000 16 vol%	-4.1	-0.3	+0.1	N.D.	-0.1
motility_chemotaxis	Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut	-2.6	-1.4	-0.4	N.D.	+0.1
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	-0.9	-2.8	-0.2	N.D.	-0.1
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-2.8	-0.9	-0.1	N.D.	-0.1
motility_chemotaxis	Motility_chemotaxis; Brachypodium roots in 0.5x MS; outer cut	-2.4	-0.8	-0.3	N.D.	-0.2
carbon source	Citric Acid 20 mM (C)	-1.4	-1.7	-0.4	N.D.	-0.1
carbon source	Cinnamic and Ethanols	-3.2	+0.2	+0.1	N.D.	-0.4
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-2.6	-0.8	-0.4	N.D.	+0.4
motility_chemotaxis	Motility_chemotaxis, R2A; outer cut	-2.4	-0.4	-0.2	N.D.	-0.3
in planta	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.9	-1.9	-0.5	N.D.	+0.1
stress	R2A with Salicylic 10 uM	-2.6	-0.8	-0.2	N.D.	+0.3
stress control	RCH2_defined_glucose_5mM with hydroxide 1 mM	-2.0	-1.3	-0.0	N.D.	+0.1
stress	R2A with p-Coumaric 0.5 mM	-2.1	-1.1	-0.1	N.D.	+0.0
stress	R2A with Isopropyl alcohol 21 g/L	-3.0	-0.4	+0.3	N.D.	-0.0
stress	R2A with N-decanoyl-DL-Homoserine lactone 10 uM	-2.1	-1.0	-0.1	N.D.	+0.2
stress	R2A with Chloride 200 mM	-3.1	-0.0	+0.2	N.D.	+0.1
soil extract	Shikimic Acid 5 mM in soil extract	-2.0	-0.9	+0.2	N.D.	+0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-2.1	-0.5	-0.2	N.D.	+0.6
r2a no shaking	R2A no shaking	-1.9	-0.8	+0.2	N.D.	+0.3
carbon source	L-Fucose (C)	-0.2	-2.7	+0.1	N.D.	+0.6
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.4	-2.7	+0.2	N.D.	-0.0
carbon source	D-Sorbitol (C)	-0.9	-2.0	+0.3	N.D.	+0.6
stress	RCH2_defined_glucose_5mM with Indole-3-pyruvic 0.5 mM	+1.6	-1.7	+0.3	N.D.	+0.1
stress	RCH2_defined_glucose_5mM with Adenine 4 mM	+0.9	-1.4	+0.6	N.D.	+0.3
carbon source	D-Mannose (C)	+1.6	-0.9	+1.0	N.D.	+1.0
carbon source	D-Glucose (C)	+1.9	-0.5	+0.6	N.D.	+0.7
carbon source	D-Fructose (C)	+1.5	-0.5	+0.6	N.D.	+1.1
carbon source	D-Glucose-6-Phosphate (C)	+0.4	-0.1	+1.0	N.D.	+1.9
carbon source	D-Gluconic Acid (C)	+1.6	-0.2	+0.9	N.D.	+0.8
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+1.9	+1.6	+0.8	N.D.	-0.1