Fitness for 5 genes in Paraburkholderia graminis OAS925

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABIE53_004583	ABIE53_004584	ABIE53_004585	ABIE53_004586	ABIE53_004587
r2a outgrowth control	R2A outgrowth control	-0.3	-1.0	+0.2	-3.7	+0.0
stress	R2A with 3-methyl-3-butenol 4.5 g/L	-0.2	+0.4	-0.3	-2.9	-0.1
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days	-0.1	-0.5	+0.1	-2.6	-0.0
stress	R2A with Ethanol 2.5 vol%	+0.2	-0.0	-0.2	-3.2	+0.1
stress	RCH2_defined_glucose_5mM with caffeic 0.5 mM	-0.2	-1.0	+0.2	-2.2	+0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.0	-1.8	+0.0	-1.2	+0.2
soil extract	Indole-3-pyruvic 5 mM in soil extract	+0.2	-0.2	-0.3	-2.2	-0.2
stress	M9 with Chloride 200 mM	-0.0	+0.7	+0.1	-3.4	-0.0
soil extract	D-Glucose 5 mM in soil extract	+0.2	-0.3	+0.3	-3.0	+0.2
carbon source	L-Tryptophan (C)	-0.2	-0.6	+0.4	-2.0	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	+0.1	+0.4	-0.1	-2.5	-0.3
in planta	Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.1	-1.3	-0.0	-1.4	+0.5
carbon source	D-Lactate (C)	-0.1	-1.8	+0.6	-0.5	-0.0
plant outgrowth control	Plant outgrowth control	-0.4	+0.9	+0.2	-2.3	-0.1
carbon source	L-Threonine (C)	+0.2	+0.3	+0.1	-2.5	+0.1
carbon source	D-Sorbitol (C)	+0.3	+0.0	+0.5	-2.3	-0.3
carbon source	D,L-Lactate (C)	+0.2	-0.7	+0.9	-1.8	+0.1
plant outgrowth control	Plant outgrowth control	-0.1	+1.0	-0.2	-1.5	-0.3
carbon source	L-Rhamnose (C)	+0.5	-0.6	+0.8	-1.7	+0.1
carbon source	D-Glucuronic Acid (C)	+0.5	+0.6	+0.3	-2.1	-0.1
carbon source	D-Sorbitol (C)	+0.5	-1.1	+0.7	-0.6	-0.2
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.3	-1.2	+0.5	+0.7	-0.4
in planta	Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days	-0.7	-1.0	+0.2	+1.2	-0.1
carbon source	4-Hydroxybenzoic Acid (C)	+0.2	-1.6	+1.2	+0.2	-0.0
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days	+0.3	-1.6	-0.0	+1.0	+0.2
stress	M9 with 3-methyl-2-butenol 2 g/L	+0.1	-1.2	+1.2	+0.3	+0.3
carbon source	4-Hydroxybenzoic Acid (C)	+0.1	-1.5	+1.2	+1.0	+0.3
carbon source	D-Fructose (C)	+0.6	-0.8	+0.8	+0.9	+0.1
carbon source	Azelaic 20 mM (C)	+0.5	-1.0	+1.6	+0.5	+0.1
carbon source	Azelaic 20 mM (C)	+0.4	-1.6	+1.7	+0.7	+0.5