Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_004526 and ABIE53_004527 are separated by 40 nucleotidesABIE53_004527 and ABIE53_004528 are separated by 8 nucleotidesABIE53_004528 and ABIE53_004529 are separated by 123 nucleotidesABIE53_004529 and ABIE53_004530 are separated by 9 nucleotides ABIE53_004526: ABIE53_004526 - uncharacterized protein (DUF1697 family), at 715,838 to 716,347 _004526 ABIE53_004527: ABIE53_004527 - putative metal-binding membrane protein, at 716,388 to 717,215 _004527 ABIE53_004528: ABIE53_004528 - putative dithiol-disulfide oxidoreductase (DUF899 family), at 717,224 to 717,991 _004528 ABIE53_004529: ABIE53_004529 - hypothetical protein, at 718,115 to 719,341 _004529 ABIE53_004530: ABIE53_004530 - glutamine cyclotransferase, at 719,351 to 720,004 _004530
Group Condition ABIE53_004526 ABIE53_004527 ABIE53_004528 ABIE53_004529 ABIE53_004530
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -1.1 -3.0 -0.4 -0.5 -0.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 -1.5 -0.2 +0.5 -2.7
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.5 -0.8 -1.2 -0.7 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.9 -1.5 +0.4 +0.9 -1.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.6 -2.2 +1.3 -0.2 -0.3
carbon source Inosine (C) -0.1 -0.7 -0.1 -1.1 -0.9
phage Burk1_100 -0.7 -0.7 -0.3 -0.0 -1.1
carbon source L-Fucose (C) -0.8 -1.4 -0.2 +0.4 -0.5
carbon source D-Lactate (C) +0.6 -1.5 +0.3 -1.3 -0.4
stress RCH2_defined_glucose_5mM with Adenine 5 mM -1.7 -0.6 +0.3 -0.1 +0.0
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.0 -1.0 -0.7 +0.7 +0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -1.3 -0.5 +0.1 +1.0
carbon source Inosine (C) +0.4 -0.4 +0.2 -0.5 -1.2
carbon source L-Threonine (C) +0.2 -1.3 +0.1 +0.4 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days +0.3 +0.5 +0.1 -0.7 -1.3
carbon source L-Proline (C) +0.4 -1.0 -0.4 -0.5 +0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.7 +0.9 +0.0 -0.9
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.0 -1.5 +0.6 +0.5 +0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +1.0 -0.2 -0.7 +0.4 -0.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 -0.9 +0.5 +0.4 +1.0
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.9 +0.2 +0.5 -0.3 -0.8
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 -0.3 -0.5 +0.7 +0.5
plant outgrowth control Plant outgrowth control -0.8 +0.0 -0.1 +0.9 +1.0
carbon source Acetylated xylan 10 g/L (C) -0.3 +0.2 -0.4 +1.1 +1.1
plant outgrowth control Plant outgrowth control -0.6 +1.0 -0.1 +0.8 +0.6
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 -0.3 -0.5 +1.2 +1.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +1.4 +0.5 +0.5 -0.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 +1.2 +0.5 -0.3 +0.9
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.2 +1.8 +0.4 -0.5 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.7 +0.4 -0.1 +0.7 +0.8
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ABIE53_004526
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ABIE53_004527
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ABIE53_004529
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ABIE53_004530
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