Fitness for 5 genes in Paraburkholderia graminis OAS925

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500 ntABIE53_004524 and ABIE53_004525 overlap by 74 nucleotidesABIE53_004525 and ABIE53_004526 are separated by 105 nucleotidesABIE53_004526 and ABIE53_004527 are separated by 40 nucleotidesABIE53_004527 and ABIE53_004528 are separated by 8 nucleotides ABIE53_004524: ABIE53_004524 - ABC-type glycerol-3-phosphate transport system substrate-binding protein, at 713,992 to 715,335 _004524 ABIE53_004525: ABIE53_004525 - hypothetical protein, at 715,262 to 715,732 _004525 ABIE53_004526: ABIE53_004526 - uncharacterized protein (DUF1697 family), at 715,838 to 716,347 _004526 ABIE53_004527: ABIE53_004527 - putative metal-binding membrane protein, at 716,388 to 717,215 _004527 ABIE53_004528: ABIE53_004528 - putative dithiol-disulfide oxidoreductase (DUF899 family), at 717,224 to 717,991 _004528
Group Condition ABIE53_004524 ABIE53_004525 ABIE53_004526 ABIE53_004527 ABIE53_004528
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 -1.0 -1.1 -3.0 -0.4
r2a outgrowth control R2A outgrowth control -1.0 -1.1 -0.9 -0.5 -0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -1.0 -0.4 -1.6 -2.2 +1.3
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=root; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.7 +0.1 -0.9 -1.3 -0.5
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.5 +0.1 -1.0 -1.0 -0.7
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.2 -1.3 -0.6 -0.7 -0.3
in planta Plant=Brachypodium_distachyon; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days +0.1 -0.4 -0.5 -0.8 -1.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.8 +0.3 -0.9 -1.5 +0.4
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days +0.3 -2.3 +0.7 -0.3 -0.5
stress RCH2_defined_glucose_5mM with Adenine 5 mM +0.2 -0.5 -1.7 -0.6 +0.3
carbon source L-Fucose (C) +0.5 -0.3 -0.8 -1.4 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.6 -0.7 -0.9 +0.5
plant outgrowth control Plant outgrowth control -0.6 -1.4 +0.4 -0.3 -0.2
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.1 +0.5 -0.6 -0.6 -0.1
plant outgrowth control Plant outgrowth control -0.7 -1.1 +0.4 -0.3 -0.2
soil extract Indole-3-pyruvic 5 mM in soil extract +0.4 -2.4 -0.1 +0.0 +0.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.1 +0.5 -0.5 -1.5 -0.2
in planta Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 +0.1 +0.0 -1.5 +0.6
phage Burk1_100 +0.6 -0.6 -0.7 -0.7 -0.3
carbon source L-Histidine (C) +0.5 -1.1 +0.1 -0.9 +0.2
carbon source D-Lactate (C) -0.2 +0.1 +0.6 -1.5 +0.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 -0.8 +0.1 +1.2 -0.2
in planta Plant=Medicago_truncatula; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sterile_soil; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=19_days -0.3 -1.5 +0.7 +0.2 +0.6
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=R2A_with_kan10; Time=21days -0.4 -1.5 +0.9 +0.2 +0.5
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.9 +0.8 +1.0 -0.2 -0.7
carbon source D-Mannose (C) +0.9 +0.8 +0.1 -1.9 +0.3
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.4 -0.3 -0.4 +1.2 +0.5
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=liquid_soil_extract; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.6 +0.7 -0.5 +0.9 -0.0
in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_liquid; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -1.4 +0.8 -0.4 +1.4 +0.1
in planta Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=clay; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days -0.3 +0.9 -0.4 +1.4 +0.5
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ABIE53_004524
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ABIE53_004525
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ABIE53_004527
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ABIE53_004528
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